YCF2_LACSA
ID YCF2_LACSA Reviewed; 2264 AA.
AC Q332R7;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 06-DEC-2005, sequence version 1.
DT 03-AUG-2022, entry version 53.
DE RecName: Full=Protein Ycf2 {ECO:0000255|HAMAP-Rule:MF_01330};
GN Name=ycf2-A {ECO:0000255|HAMAP-Rule:MF_01330};
GN and
GN Name=ycf2-B {ECO:0000255|HAMAP-Rule:MF_01330};
OS Lactuca sativa (Garden lettuce).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae;
OC Lactucinae; Lactuca.
OX NCBI_TaxID=4236;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Cisco;
RX PubMed=16604461; DOI=10.1007/s11248-005-3997-2;
RA Kanamoto H., Yamashita A., Asao H., Okumura S., Takase H., Hattori M.,
RA Yokota A., Tomizawa K.;
RT "Efficient and stable transformation of Lactuca sativa L. cv. Cisco
RT (lettuce) plastids.";
RL Transgenic Res. 15:205-217(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Salinas;
RA Timme R.E., Kuehl J.V., Boore J.L., Jansen R.K.;
RT "A comparison of the first two published chloroplast genomes in Asteraceae:
RT Lactuca and Helianthus.";
RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Probable ATPase of unknown function. Its presence in a non-
CC photosynthetic plant (Epifagus virginiana) and experiments in tobacco
CC indicate that it has an essential function which is probably not
CC related to photosynthesis.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
CC -!- SIMILARITY: Belongs to the Ycf2 family. {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
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DR EMBL; AP007232; BAE47639.1; -; Genomic_DNA.
DR EMBL; AP007232; BAE47655.1; -; Genomic_DNA.
DR EMBL; DQ383816; ABD47276.1; -; Genomic_DNA.
DR EMBL; DQ383816; ABD47296.1; -; Genomic_DNA.
DR RefSeq; YP_398372.1; NC_007578.1.
DR RefSeq; YP_398388.1; NC_007578.1.
DR AlphaFoldDB; Q332R7; -.
DR EnsemblPlants; rna-gnl|WGS:NBSK|LSAT_8X26500_mrna; cds-PLY76277.1; gene-LSAT_8X26500.
DR GeneID; 3772783; -.
DR GeneID; 3772784; -.
DR Gramene; rna-gnl|WGS:NBSK|LSAT_8X26500_mrna; cds-PLY76277.1; gene-LSAT_8X26500.
DR KEGG; lsv:3772783; -.
DR KEGG; lsv:3772784; -.
DR OrthoDB; 10010at2759; -.
DR GO; GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_01330; Ycf2; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR008543; Uncharacterised_Ycf2.
DR PANTHER; PTHR33078:SF22; PTHR33078:SF22; 2.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF05695; DUF825; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Chloroplast; Nucleotide-binding; Plastid.
FT CHAIN 1..2264
FT /note="Protein Ycf2"
FT /id="PRO_0000242533"
FT BINDING 1611..1618
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01330"
SQ SEQUENCE 2264 AA; 265917 MW; D8A0AAD465A62E5C CRC64;
MTGHEFKSWI LELREILREI KNSHYFLDSW TQFNSVGSFI HIFFHQERFI KLFDSRIWSI
LLSHNSQGST SNRYFTIKGV ILFGVAVLIY RINNRNMVER KNLYLIGLLP IPMNSIGPRN
DTLEESVGSS NINRLIVSLL YLPKGKKIYE SSFLNPKEST WVLPITKKCS MPESNWGSRW
WRDWIGKKRD SSCKISNETV AGIEILFKEK DLKYLEFFFV YYRDDPIRKD HDWELFDRLS
LRKRQNRINL NSGPLFEILV KHWICYLMSA FREKIPIEVE GFFKQQGAGS TIKSNDIEHV
SHLFSRNKSA ISLQNCAQFH MWQFRQDLFV SWGKNPPESD LLRNVSRENL IWLDNVWLVN
KDRFFRKVRN VSSNIQYDST RSSFVQVRDS SQLKGSSDQS RDHFDSISNE DSEYHTLINQ
REIQQLKERS ILWDPSFLQT EGTEIESNRF PKCLSGYSSM SRLFTEREKQ MINHLLPEEI
EEFLGNPTRS VRSFFSDRWS EFHLGSNPTE RSTRDQKLLK KQQDLSFLRR SENKEMVNLF
KIITYLQNTV SIHPISSDSG CDMVPKDEPD MDSSNKISFL NKNPFFDLFH LFHDRNRGGY
TLHHDFESEE RFQELADLFT LSITEPDLVY HKRFAFSIDS YGLDPKQFLN GVFNSRYEWK
TTSLLVLLVL LPIFYEENES FYRRIRKKRV RISCGNDLEE PKPKIVVFAS NNIMEAANQY
RLIRNLIQIQ HSTHRYIRNV LNRFFLMNRS DRNFKYGIQR DQIGKDTLNH RTLMKYMINQ
HLSNLKKSQK RWFDPLIFFS RTKRSMNRDP DAYRYKWSTG SKNFQEHFVS EQKSRFQVVF
DRLRINQYSI DWSEVIDKKD LSKPLRFFLS KLLLFLSNSL PFLFVSFGNI PIHRSEIYIY
ELKGPNDPQF LESIGLQIVH LKKLKPFLLD DHETCQKSKF LINGGTISPF LFNKIPKWMI
DSFHTRNNRR KSFDNTDSYF SMIFHDQYNW LNPVKSFHRS SLRSSFYKAN QLRFLNNPHH
FCFYCNKRFP FYVEKARINN YDFTYGQFLN ILFIRNKIFS LCVGKKKHAF WGRDTISAIE
SQVSNIFIPK AFPQSGDETY NLYKSFHFPS RSNPFVRRAI YSIADISGTP LTEGQIVNFE
RTYCQPLSDM NLSDSEGKNL YQYLNFNSNM GLIHTPCYEK YLPSEKRKKR SLCLKKCVEK
GQMYRTFQRD SAYSTLSKWN LFQTYMPWFL TSTGYRYLKF LFLDTFSDLL PILSSSQKFV
SIFHDIMHGS NISWRILQKK FCLPQRNLIS EISSKCLHNL LLSEEMIHRN NESPLISTHL
TNVREFLYAI LFLLLVAAYL ACTRLLFVFG ASSELQTEFE KVKSLMIPSS MIELRKLLDR
YPTSEPNSFW FLKQLGDSLG GNMLLGGGPA YRVKSIRSKK KYLNINLIDI IDLISIIPNP
INRITFSRNT RHLSHTSKEI YSLIRKRKNV NGDWIDDKIE SWVANSDSID DEKREFLVQF
STLTTEKRID QILLSLTHSD HFSKNDSGYQ MIEQPGAIYL RYLVDIHKKY LMNYEFNTSS
LAERRIFLAH YQTITYSQTS CGANSLHFPS HGKPFSLRLA LSLSRGTLVI GSIGTGRSYL
VKYLAKNSYL PFITVFLNKS LDNKSQGFDN IDVDASDDSD ASDDIDASDD ILDMELELLT
SMNALTMDMM PEDEDLLYIT LQFELAKAMS PCIIWIPNIH DLDVNESNYL SPGLLVNLLS
RDYETRNILV IASTHIPQKV DPALIAPNKL NTCIKIRRLL IPQQRKHFFT LSYTRGFHLE
KKMFHTNGFG SITMGSNARD LVALTNEALS ISITQNKSII DTNTIRSALH RQIWDLRSQV
RSVQDHGILF YKIGRAVAQN VLLSNCPIDP ISIYMKKKSC NEVDYYLYNW YFELGTSMKK
LTILLYLLSC SAGSVTQDLW SLPGPDEKNG ITPYGLVEND SGLVRGLLEV EGALVGSSRT
CSQFDKDRVT LLLRPEPRNP LDMMQNGSCS ILDQRFLYEK DESEFEEGDE RQQIEEDLFN
HIVWAPRIWR PWGFLFDCIE RPNELGFPYW SRSFRGKRIV YDEEDELQEN DSEFLQNGTV
QYQTRDISSK EQGLFRISQF IWDPADPLFF LFKAQPFVSV FSHRELFADE EMSKGLLTPQ
KNRPTSLYKR WFIKKTQEKH FELLINRQRW LRTNRSLSNG SFRSNTLSES YQYLSNLFLS
NGTLLDQMTK ALLRKRWLFP DEMQIGFMEQ DKDFPFLSQK DMWP
