YCF2_NICSY
ID YCF2_NICSY Reviewed; 2280 AA.
AC Q3C1N4;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 22-NOV-2005, sequence version 1.
DT 03-AUG-2022, entry version 54.
DE RecName: Full=Protein Ycf2 {ECO:0000255|HAMAP-Rule:MF_01330};
GN Name=ycf2-A {ECO:0000255|HAMAP-Rule:MF_01330};
GN and
GN Name=ycf2-B {ECO:0000255|HAMAP-Rule:MF_01330};
OS Nicotiana sylvestris (Wood tobacco) (South American tobacco).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae;
OC Nicotiana.
OX NCBI_TaxID=4096;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16435119; DOI=10.1007/s00438-005-0092-6;
RA Yukawa M., Tsudzuki T., Sugiura M.;
RT "The chloroplast genome of Nicotiana sylvestris and Nicotiana
RT tomentosiformis: complete sequencing confirms that the Nicotiana sylvestris
RT progenitor is the maternal genome donor of Nicotiana tabacum.";
RL Mol. Genet. Genomics 275:367-373(2006).
CC -!- FUNCTION: Probable ATPase of unknown function. Its presence in a non-
CC photosynthetic plant (Epifagus virginiana) and experiments in tobacco
CC indicate that it has an essential function which is probably not
CC related to photosynthesis.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
CC -!- SIMILARITY: Belongs to the Ycf2 family. {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
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DR EMBL; AB237912; BAE46698.1; -; Genomic_DNA.
DR EMBL; AB237912; BAE46733.1; -; Genomic_DNA.
DR RefSeq; YP_358722.1; NC_007500.1.
DR RefSeq; YP_358756.1; NC_007500.1.
DR AlphaFoldDB; Q3C1N4; -.
DR GeneID; 3735126; -.
DR GeneID; 3735127; -.
DR KEGG; nsy:3735126; -.
DR KEGG; nsy:3735127; -.
DR Proteomes; UP000189701; Chloroplast Pltd.
DR GO; GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_01330; Ycf2; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR008543; Uncharacterised_Ycf2.
DR PANTHER; PTHR33078:SF22; PTHR33078:SF22; 3.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF05695; DUF825; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Chloroplast; Nucleotide-binding; Plastid; Reference proteome.
FT CHAIN 1..2280
FT /note="Protein Ycf2"
FT /id="PRO_0000242534"
FT BINDING 1631..1638
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01330"
SQ SEQUENCE 2280 AA; 266815 MW; E246D5F3D902C06D CRC64;
MRGHQFKSWI FELREILREI KNSHHFLDSW TQFNSAGSFI HIFFHQERFL KLFDPRIWSI
LLSRNSQGST SNRYFTIKGV ILFVVAVLIY RINNRNMVER KNLYLIGLLP IPMNSIGPRN
DTLEESVGSS NINRLIVSLL YLPKGKKISE SCFLNPKEST WVLPITKKCS MPESNWGSRW
WRNWIGKKRD SSCKISNETV AGIEILFKEK DLKYLEFLFV YYMDDPIRKD HDWELFDRLS
LRKSRNRINL NSGPLFEILV KHWISYLMSA FREKIPIEVE GFFKQQGAGS TIQSNDIEHV
SHLFSRNKWA ISLQNCAQFH MWQFRQDLFV SWGKNPPESD FLRNVSRENW IWLDNVWLVN
KDRFFSKVQN VSSNIQYDST RSSFVQVTDS SQLKGSSDQS RDHLDSISNE DSEYHTLINQ
REIQQRKERS ILWDPSFLQT ERKEIESGRF PKCLSGYSSM SRLFTEREKQ MINHLFPEEI
EEFLGNPTRS VRSFFSDRWS ELHLGSNPTE RSTRDQKLLK KQQDLSFVPS KRSENKEMVN
IFKIITYLQN TVSIHPISSD PGCDMVPKDE PDMDSSNKIS FLNKNPFFDL FHLFHDRNRG
GYTLHYDFES EERFQEMADL FTLSITEPDL VYHKGFAFSI DSCGLDQKQF LNEARDESKK
KSLLVLPPIF YEENESFSRR IRKKWVRISC GNDLEDPKPK IVVFASNNIM EAVTQYRLIR
NLIQIQYSTY GYIRNVLNRF FLMNRSDRNF EYGIQRDQIG KDTLNHRTIM KYTINQYLSN
LKKSQKKWFE PLILISRTER SMNRDPDAYR YKWSNGSKNF QEHLEQSVSE QKSRFQVVFD
RLRINQYSID WSEVIDKKDL SKPLRFFLSK SLLFLSKLLF FLSNSLPFFC VSFGNIPIHR
SEIYIYELKG PNDQLCNQLL ESIGLQIVHL KKWKPFLLDD HDTSQKSKFL INGGTISPFL
FNKIPKWMID SFHTRNNRRK SFDNPDSYFS MIFHDQDNWL NPVKPFHRSS LISSFYKANR
LRFLNNPHHF CFYWNTRFPF SVEKARINNS DFTYGQFLNI LFIRNKIFSL CVGKKKHAFW
GRDTISPIES QVSNIFIPND FPQSGDETYN LYKSFHFPSR SDPFVRRAIY SIADISGTPL
TEGQIVNFER TYCQPLSDMN LSDSEGKNLH QYLNFNSNMG LIHTPCSEKD LSSEKRKKRS
LCLKKCVEKG QMYRTFQRDS AFSTLSKWNL FQTYMPWFLT STGYKYLNLI FLDTFSDLLP
ILSSSQKFVP IFHDIMHGSG ISWRILQKKL CLPQWNLISE ISSKCLHNLL LSEEMIHRNN
ESPLISTHLR SPNAREFLYS ILFLLLVAGY LVRTHLLFVS RASSELQTEF EKVKSLMIPS
SMIELRKLLD RYPTSEPNSF WLKNLFLVAL EQLGDSLEEI RGSASGGNML GPAYGVKSIR
SKKKDWNINL IEIIDLIPNP INRITFSRNT RHLSHTSKEI YSLIRKRKNV NGDWIDDKIE
SWVANSDSID DEEREFLVQF STLTTENRID QILLSLTHSD RLSKNDSGYQ MIEQPGAIYL
RYLVDIHKKH LMNYEFNPSC LAERRIFLAH YQTITYSQTS CGENSFHFPS HGKPFSLRLA
LSPSRGILVI GSIGTGRSYL VKYLATNSYV PFITVFLNKF LDNKPKGFLL DEIDIDDSDD
IDDSDNLDAS DDIDRDLDTE LKLLTRMNGL TMDMMPEIDR FYITLQFELA KAMSPCIIWI
PNIHDLDVNE SNDLALGLLV NHLSRDCERC STRNILVIAS THIPQKVDPA LIAPNKLNTC
IKIRRLLLPQ QRKHFFTLSY TRGFHLEKKM FHTNGFGSIT MGSNARDLVA LTNEVLSISI
TQKKSIIDTN TIRSALHRQT WDLRSQVRSV QDHGILFYQI GRAVAQNVLL SNCPIDPISI
YMKKKSCNEG DSYLYKWYFE LGTSMKRLTI LLYLLSCSAG SVAQDLWSLS GPDEKNGITS
YGLVENDSDL VHGLLEVEGA LVGSSRTEKD CSQFDNDRVT LLLRPEPRNP LDMMQNGSCS
ILDQRFLYEK YESEFEEGEG EGALDPQEDL FNHIVWAPRI WRPWGFLFDC IERPNELGFP
YWSRSFRGKR IIYDEEDELQ ENDSEFLQSG TMQYQTRDRS SKEQGLFRIS QFIWDPADPL
FFLFKDQPPG SVFSHRELFA DEEMSKGLLT SQTDPPTSIY KRWFIKNTQE KHFELLINRQ
RWLRTNSSLS NGSFRSNTLS ESYQYLSNLF LSNGTLLDQM TKTLLRKRWL FPDEMKIGFM