YCF2_PELHO
ID YCF2_PELHO Reviewed; 2110 AA.
AC Q32836; Q06FN5;
DT 10-MAY-2004, integrated into UniProtKB/Swiss-Prot.
DT 28-NOV-2006, sequence version 2.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Protein Ycf2;
GN Name=ycf2-A;
GN and
GN Name=ycf2-B;
OS Pelargonium hortorum (Common geranium) (Pelargonium inquinans x Pelargonium
OS zonale).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Geraniales; Geraniaceae; Pelargonium.
OX NCBI_TaxID=4031;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=cv. Irene;
RX PubMed=8082181; DOI=10.1007/bf00351492;
RA Downie S.R., Katz-Downie D.S., Wolfe K.H., Calie P.J., Palmer J.D.;
RT "Structure and evolution of the largest chloroplast gene (ORF2280):
RT internal plasticity and multiple gene loss during angiosperm evolution.";
RL Curr. Genet. 25:367-378(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Ringo White;
RX PubMed=16916942; DOI=10.1093/molbev/msl089;
RA Chumley T.W., Palmer J.D., Mower J.P., Fourcade H.M., Calie P.J.,
RA Boore J.L., Jansen R.K.;
RT "The complete chloroplast genome sequence of Pelargonium x hortorum:
RT organization and evolution of the largest and most highly rearranged
RT chloroplast genome of land plants.";
RL Mol. Biol. Evol. 23:2175-2190(2006).
CC -!- FUNCTION: Probable ATPase of unknown function. Its presence in a non-
CC photosynthetic plant (Epifagus virginiana) and experiments in tobacco
CC indicate that it has an essential function which is probably not
CC related to photosynthesis.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Ycf2 family. {ECO:0000305}.
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DR EMBL; M83200; AAA73173.1; -; Genomic_DNA.
DR EMBL; DQ897681; ABI17302.1; -; Genomic_DNA.
DR EMBL; DQ897681; ABI17338.1; -; Genomic_DNA.
DR PIR; T31352; T31352.
DR RefSeq; YP_784110.1; NC_008454.1.
DR RefSeq; YP_784146.1; NC_008454.1.
DR AlphaFoldDB; Q32836; -.
DR PRIDE; Q32836; -.
DR GeneID; 4362948; -.
DR GeneID; 4362969; -.
DR GO; GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR Gene3D; 3.40.50.300; -; 2.
DR HAMAP; MF_01330; Ycf2; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR008543; Uncharacterised_Ycf2.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF05695; DUF825; 4.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Chloroplast; Nucleotide-binding; Plastid.
FT CHAIN 1..2110
FT /note="Protein Ycf2"
FT /id="PRO_0000223064"
FT REGION 1852..1876
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 1336..1343
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
FT VARIANT 633
FT /note="D -> V (in strain: cv. Irene)"
FT VARIANT 1322
FT /note="L -> F (in strain: cv. Irene)"
FT VARIANT 1658
FT /note="S -> L (in strain: cv. Irene)"
FT VARIANT 1692..1693
FT /note="KS -> NW (in strain: cv. Irene)"
FT VARIANT 1777..1778
FT /note="AC -> LS (in strain: cv. Irene)"
FT VARIANT 1791..1795
FT /note="RAEPS -> GRTK (in strain: cv. Irene)"
FT VARIANT 1847..1848
FT /note="EA -> DG (in strain: cv. Irene)"
SQ SEQUENCE 2110 AA; 245618 MW; 8C05FFA2D5BEEA1C CRC64;
MDEQEFKLFL KFFILELKGI LREIKNSHQL LDSWTKLNSL GTLIQIFFNP ERAFQLLDPR
VWKILLSRNS RGWRKTRHFT IGRVLLFVVV VLMYRMSRRN MVENKKSYLT GVLPIPLNPI
GHRNDTLEES IGFSNINRLI LPLLYLPKGK KIPESSFLDP NESTWALPIT KKSIMPESRW
GSRWWCSWVG KRRDSSCKRA HKTVAGIEIS FKEKKSKYLE FLEDSEYPTL INQREIQQIK
EESILWHPSP SLERTEEEIK EFLGNSTRSL RSFFSDRWSE LYLSSNPTER FTRDQKLLKQ
DLSFVPYRRS ENQEIVNLFK IITYLQKTVS IYPISSDPGC DRVPKDELDV DSSKKISFFK
KNPFFDLLNL FHDRSRGGYT LERDFESEER FEERADLFTL SITEPDQVYH NSPKMDLIHI
QEKGYIRKVL DRFFLMNRSA RNFESGIPGA QIGNETLSHR TLMKYTVNRH FSSLKKSRKK
SFDPLLFIER SMNRDPAAYR DKWSKGGKTF QEHLEHFVSE QKNRFKVQKS RFKAVFDRFH
QSQYSIDWSV FIDKQDFPKA RLFFLFVLVR SFLYKSLPFL LSKLPLLLSK LPLLVSKVLP
LLSKLLPFFF VSCGNIPIHR SEIRIYELKG PTDQPCNPLL ESIGLQILHL NKLKPCLLDD
HETSQKSKIV GTIDNTDSYF SILFDDEENW MNPVKAFQRS SLISAFYKAN RLRFLNNPHR
FSFYCNKIFP FVVEKARFKN SDFLYGQFLK TFFIRKKPFS LCGEKHAFGE RATLLPIESE
VSKILIPQVS KILIPDDFPQ SGDERYNLCK SFHFPTRSVP LVDRALYSIA DISERPLTEG
QMVNLERTSF QPLSDIHLSD SERKNLHQDL NFNSNMGLIH TPYSEKDLPS EKRKKRNLGR
NLKKCVEKGQ MFRTLLSKMY RTLLSKWNLF QTYMPWFLTS TGYKYLTLLF LDLFSDLVPI
LSLGIRQNCV SLFDHILGDI RDDIRQGVIR PWQILQEKWV LPQRNRIREI SRMCLRNLTL
SAERIRRNNE SPLTHTHLRS PNVLEFLYST LLLLLVAGYL VCTYLSRLSK DYGELQTELK
KVKSLMIPSY TIELRKLMDR YPPSELNSFG LKNLFLVAME ELKESLSVVG NMLEGGGRAY
GVEAIFSNWN LNLIDISDLI SLIPNPIDRI TFSINTRHLS HTSKEIYSFI RKRERVYGAW
IDDKIESLLS TSVAIDDCDR GNLLQFSTLT LTTEKGVDQI LLSLTQSSKN ASGSQMIEQP
GEMYLRHVVD LQKKYLMGYE FNTSSLAERR IFLAHYQTMT YSKTSCGVNA FHFPSHEKPF
SLRLDLSPPR GILVIGSIGT GRSYLIKSLA KNTHFPLITL EMEARSSWPF FQHLDEIYGD
QLEYVYDDTS LSVEVEEEED TSWGIEEWSL PDTREDDEIE DQAEMDTRRD LDGIEYTHAI
QDMIDLGISV DAQLNFLPES ILINEIEGHD VDELDEAETE LWELWMEEWD RHLLGISLQF
ALVRAMTPCI LWIPNIHDVD LEDRTTLAGL MNSLSGDSEG RSTRKTLVIA STHLPKKVDP
ALIASNRFNT CIKVRRLLST QERERFFTLS YTRGFHFEKE IFDTNGFRSI TTQDLAALTN
EALSISITQK KSIIDTNTIR FALHRQTWAV ESRSISISDH GILFYQTGRA LAQNLFLSQG
LIDPISVYIK KKSCNDDGYS YLYRWYLELG TSMKRLTILL YLLSCFAGSV AQDLWSPPGP
DDKAEMFSYG LVENDSHLAQ GLLELEGALV ASGTEKACSR FDNDQVTLLF RAEPSLDRMQ
DGFCSIFEQE GEEAAPGLEK PLVTHIVSAP RIWNPWLILF DWIDIEEASR KEEEAELQDE
EAELQDEGAG RKDEEAELQE FQDLEDPQDQ EGGLQELQGL QKEEAYLYQK ALELQAQEDE
LQKYGPGFLE SGTIMKKYPT RNRFRFFTEQ GFFQASQFIW YPADSLFFLL KEQALGFVFS
QPEFFADEEI SKEGLLALTV QRLPFSTTCH WFIKKRQERH FEFLIHRERW LRTNSSLSNG
FFCSKTQTLF ESYQYLSNLF LSNGRLVDQM TKTLLRKRWI FPDEMKIQIG FMYTGEGFPI
TSPERYVAMK
