YCF2_POPTR
ID YCF2_POPTR Reviewed; 2285 AA.
AC A4GYV4;
DT 22-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 17-APR-2007, sequence version 1.
DT 03-AUG-2022, entry version 58.
DE RecName: Full=Protein Ycf2 {ECO:0000255|HAMAP-Rule:MF_01330};
GN Name=ycf2-1 {ECO:0000255|HAMAP-Rule:MF_01330};
GN OrderedLocusNames=Poptr_cp066;
GN and
GN Name=ycf2-2 {ECO:0000255|HAMAP-Rule:MF_01330};
GN OrderedLocusNames=Poptr_cp098;
OS Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS trichocarpa).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX NCBI_TaxID=3694;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nisqually;
RX PubMed=16973872; DOI=10.1126/science.1128691;
RA Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S.,
RA Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J.,
RA Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y.,
RA Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J.,
RA Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F.,
RA Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA Rokhsar D.S.;
RT "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL Science 313:1596-1604(2006).
CC -!- FUNCTION: Probable ATPase of unknown function. Its presence in a non-
CC photosynthetic plant (Epifagus virginiana) and experiments in tobacco
CC indicate that it has an essential function which is probably not
CC related to photosynthesis. {ECO:0000255|HAMAP-Rule:MF_01330}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
CC -!- SIMILARITY: Belongs to the Ycf2 family. {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
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DR EMBL; EF489041; ABO36749.1; -; Genomic_DNA.
DR EMBL; EF489041; ABO36779.1; -; Genomic_DNA.
DR RefSeq; YP_001109545.1; NC_009143.1.
DR RefSeq; YP_001109575.1; NC_009143.1.
DR AlphaFoldDB; A4GYV4; -.
DR GeneID; 4929717; -.
DR GeneID; 4929768; -.
DR KEGG; pop:4929717; -.
DR KEGG; pop:4929768; -.
DR eggNOG; ENOG502SDKG; Eukaryota.
DR InParanoid; A4GYV4; -.
DR Proteomes; UP000006729; Chloroplast.
DR GO; GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_01330; Ycf2; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR008543; Uncharacterised_Ycf2.
DR PANTHER; PTHR33078:SF22; PTHR33078:SF22; 2.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF05695; DUF825; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Chloroplast; Nucleotide-binding; Plastid; Reference proteome.
FT CHAIN 1..2285
FT /note="Protein Ycf2"
FT /id="PRO_0000343790"
FT BINDING 1638..1645
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01330"
SQ SEQUENCE 2285 AA; 268328 MW; 87FCFCCCF47910FF CRC64;
MKGHQFKSWI FELREILREI KNSHYFLDSW TQFNSVGSFI HIFFHQERFI KLLDSRIWSI
LFSRNSQGST SNRYFTIKGV VLFVVVVLIY RINNRKMVER KNLYLTGLLP IPMNSIGPRN
DTLEESFGSS NINRLIVSLL YLPKGKKISE SRFLDPKEST WVLPITKKCI MSESNWGSRW
WRNWIGKKRD SSCKISNETV AGIEISFKEK DIKYLEFLFV YYMDDPIRKD HDWELFDRLS
PRKGRNIINL NSGQLFEILV KDWICYLMFA FREKIPIEVE GFFKQQGAGS TIQSNDIEHV
SHLFSRKKWA ISLQNCAQFH MWQFRQDLFV SWGNNPHESD FLRNISRENW IWLDNVWLVN
KDRFFSKARN ISSNIQYDST RSSFVQGRDS SQLKGSSDQS RDHFDSISNE DSEYHTLINQ
REIQQLKERS ILWDPSFLQT ERTEIESDRF PKCLSGYSSM SRLFTEGAKE MNNHLLPEEI
EEFLGNPTRS IRSFFSDRWS ELHLGSNPTE RSTRDQKLLK KEQDVSFVPS RRSENKEIVN
IFKTITYLQN TVSIHPISSD PGCDMVLKDE LDMDSSNKIS FLNKNPFFDL FHLFHDRNGG
GYTLHHDFES EERFQEMADL FTLSITEPDL VYHKGFAFFI DSYGLDQKQF LNEVFNSRDE
SKKKSLLVLP PIFYEENESF YRRIRKKWVR ISCGNDLEDP KQKRVVFASN NIMEAVNQYG
LIRNLIQIQY STYGYIRNVL NQFFLMNRSD RNFEYGIQKD QIGNDTLNHR TLMKYTINQH
LSNLKQSQKK WFDPLIFLSR TERSMNWDPN SYRYKWSNGS NNFQEHLEHF ISEQKSRFLF
QVVFDRLRIN QYSIDWSEVI DKKDLSKSLP FFLSKLLLFL SKFLLFLSNS LPFFFVSFGN
IPIHRSEIHI YELKGPNDQL CNQLLEPIGL QIVHLKKWKP FLLDDHDTSQ KSKFLINGGT
ISPFLFNKIP KWMIDSFHTR NNRRKSFDNT DSSFSMISHD QDNWLNPVKP FHRSSLISSF
YKANRLRFLN NLHHFCFYCN KRFPFYVEKA RIKNYDFTYG QFLNILFIRN KIFSLCGGKK
KHAFLERDTI SPIESQVSNI FIPNDFPQSG DESLYKSFHF PIRPDPFVRR AIYSIADVSG
TPLTEGQIFN FERTYCQPLS DINLSDSEGK NLHQYLNFNS NMGLIHTPCS EKYLPSEKRK
KRSLCLKKCV EKGQMYRTFQ RDSAFSTLSK WNLFQTYMPW FLTSTGYKYL NLIFLDTFSD
HLLPILSSSQ KIVSIFHDIM HGSDISWRIL QKNLWKTQWN LISEISSKCL HNLLLSEEMI
HRNNEPPLIS TRLRSPNVRE FLYSILFLLL VAGYLVRTHL LFVSRAYSEL QTEFEKVKSL
MIPSYMIELR KLLDRYPTSE LNSFWLKNLF LVALEQLGDL LEEIRGSASG GNMLWGGGPA
YGVKSIRSKK KFFNINLIDL ISIIPNPINR ITFSRNTRHL SHTSKEIYSL IRKRKNVNGD
WIDDKIESLV ANSDSIDDKE REFLVQFSTL TTEKRIDQIL LSLTHSDHLS KNDSGYQMIE
EPGAIYLRYL VDIHKKYLMN YEFNTPCLAE RRIFLAHYQT ITYSQTSCGA NSFHFPSHGK
PFSLRLALSP SRGILVIGSI GTGRSYLVKY LATNSYVPFI TVFLNKFLDN KPKGFLIDDR
DDIDDSDDID VSDDIDRDLD TELELLTRMN VLTMDMMPEI DRFYITLQFE LAKAMSPCII
WIPNIHDLDV NESNYLSLGL LVNYLSRDCE RCSTRNILVI ASTHIPQKVD PALIAPNKLN
TCIKIRRLLI PQQRKHVFTL SYSRGFHLEK KMFHTKRFGS VTMGSNVRDL VALTNEALSI
SITQKKSIID TNIIRSALHR QTWDLRSQVR SVQDHGILFY QIGRAVAQNV FLSNCPIDPI
SIYMKKKSCN EGDSYLYKWY FELGTSMKKL TILLYLLSCS AGSIAQDLWS LPGPDEKNGI
TYYGLVENDS DLVHGLLEVE GALVGSSRTE KDCSQFDNDR VTLLLRPEPR SPLDMMQNGS
CSILDQRFLY EKYESEFEEG EVEGILDPQQ IEEDLFNHIV WAPRIWSPWG FLFDCIERPN
SLGFPYWARS FRGKRIIYDE EDELQENDSE FLQSGTMQYQ IRDRSSKEQG VFRISQFIWD
PADPLFFLFK DQPLVSVFSH REFFADEEMS KGLLTSQTDP PTSIYKRWFI KNTQEKHFEL
LIHRQRWLRT KSSLSNGFFR SNTLSESYQY LSNLFLSNGR LLDQMTKALL RKRWLFPDEM
KIGFM