YCF2_SOLTU
ID YCF2_SOLTU Reviewed; 2278 AA.
AC Q27RY7; Q2VEB9;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 04-APR-2006, sequence version 1.
DT 03-AUG-2022, entry version 65.
DE RecName: Full=Protein Ycf2 {ECO:0000255|HAMAP-Rule:MF_01330};
GN Name=ycf2-A {ECO:0000255|HAMAP-Rule:MF_01330};
GN and
GN Name=ycf2-B {ECO:0000255|HAMAP-Rule:MF_01330};
OS Solanum tuberosum (Potato).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.
OX NCBI_TaxID=4113;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Desiree;
RX PubMed=16835751; DOI=10.1007/s00299-006-0196-4;
RA Chung H.-J., Jung J.D., Park H.-W., Kim J.-H., Cha H.W., Min S.R.,
RA Jeong W.-J., Liu J.R.;
RT "The complete chloroplast genome sequences of Solanum tuberosum and
RT comparative analysis with Solanaceae species identified the presence of a
RT 241-bp deletion in cultivated potato chloroplast DNA sequence.";
RL Plant Cell Rep. 25:1369-1379(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Desiree;
RA Gargano D., Scotti N., Vezzi A., Bilardi A., Valle G., Grillo S., Cardi T.;
RT "Complete chloroplast genome sequences of Solanum tuberosum cultivar
RT Desiree and comparative analyses with other Solanaceae genomes.";
RL Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Probable ATPase of unknown function. Its presence in a non-
CC photosynthetic plant (Epifagus virginiana) and experiments in tobacco
CC indicate that it has an essential function which is probably not
CC related to photosynthesis.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
CC -!- SIMILARITY: Belongs to the Ycf2 family. {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
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DR EMBL; DQ231562; ABB90081.1; -; Genomic_DNA.
DR EMBL; DQ231562; ABB90099.1; -; Genomic_DNA.
DR EMBL; DQ386163; ABD47099.1; -; Genomic_DNA.
DR EMBL; DQ386163; ABD47119.1; -; Genomic_DNA.
DR RefSeq; YP_635682.1; NC_008096.2.
DR RefSeq; YP_635701.1; NC_008096.2.
DR AlphaFoldDB; Q27RY7; -.
DR STRING; 4113.PGSC0003DMT400053314; -.
DR GeneID; 4099888; -.
DR GeneID; 4099925; -.
DR KEGG; sot:4099888; -.
DR KEGG; sot:4099925; -.
DR eggNOG; ENOG502QRDV; Eukaryota.
DR InParanoid; Q27RY7; -.
DR OrthoDB; 10010at2759; -.
DR Proteomes; UP000011115; Unassembled WGS sequence.
DR GO; GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_01330; Ycf2; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR008543; Uncharacterised_Ycf2.
DR PANTHER; PTHR33078:SF22; PTHR33078:SF22; 2.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF05695; DUF825; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Chloroplast; Nucleotide-binding; Plastid; Reference proteome.
FT CHAIN 1..2278
FT /note="Protein Ycf2"
FT /id="PRO_0000242538"
FT BINDING 1632..1639
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01330"
FT CONFLICT 1188
FT /note="S -> P (in Ref. 1; ABB90081/ABB90099)"
FT /evidence="ECO:0000305"
FT CONFLICT 1649..1661
FT /note="SYVPFITVFLNKF -> FLCSFHYGISEQV (in Ref. 1; ABB90081/
FT ABB90099)"
FT /evidence="ECO:0000305"
FT CONFLICT 2269
FT /note="F -> S (in Ref. 1; ABB90081/ABB90099)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 2278 AA; 266441 MW; 7A1037328FDF6F6D CRC64;
MRGHQFKSWI FELREILREI KNSHHFLDSW TQFNSVGSFI HIFFHQERFL KLFDPRIWSI
LLSRNSQGST SNRYFTIKGV ILFVVAVLIY RINNRNMVER KNLYLIGLLP IPMNSIGPRN
DTLEESVGSS NINRLIVSLL YLPKGKKISE SCFLNPKEST WVLPITKKCS MPESNWGSRW
WRNWIGKKRD SSCKISNETV AGIEILFKEK DLKYLEFLFV YYMDDPIRKD HDWELFDRLS
LRKSRNRINL NSGPLFEILV KHWISYLMSA FREKIPIEVE GFFKQQGAGS TIQSNDIEHV
SHLFSRNKWA ISLQNCAQFH MWQFRQDLFV SWGKNPPESD FLRNVSRENW IWLDNVWLVN
KDRFFSKVQN VSSNIQYDST RSSFVQVTDS SQLKGSSDQS RDHLDSISNE DSEYHTLINQ
REIQQRKERS ILWDPSFLQT ERKEIESGRF PKCLSGYSSM SRLFTEREKQ MINHLFPEEI
EEFLGNPTRS VRSFFSDRWS ELHLGSNPTE RSTRDQKLLK KQQDLSFVPS RRSEKKEMVN
IFKIITYLQN TVSIHPISSD PGCDMVPKDE PDMDSSNKIS FLNKNPFFDL FHLFHDRNRG
GYTLHYDFAS EERFQEMADL FTLSITEPDL VYHKGFAFSI DSCGLDQKQF LNEARDESKK
KSLLVLPPIF YEENESFSRR IRKKWVRISC GNDLEDPKPK IVVFASNNIM EAVTQYRLIR
NLIQIQYSTY GYIRNVLNRF FLMNRSDRNF EYGIQRDQIG KDTLNHRTIM KYTINQYLSN
LKKSQKKWFE PLILISRTER SMNRDPDAYR YKWSNGSKSF QEHLEQSVSE QKSRFQVVFD
RLRINQYSID WSEVIDKKDL SKSLRFFLSK SLLFLSKLLL FLSNSLPFFC VSFGNIPIHR
SEIYIYEELK GPNDQLCNQL LESIGLQIVH LKKLKPFLLD DHDTSQKSKF LINGGTISPF
LFNKIPKWMI DSFHTRNNRR KSFDNPDSYF SMIFHDQDNW LNPVKPFHRS SLISSFYKAN
RLRFLNNPHH FCFYWNTRFP FSVEKARINN SDFTYGQFLN ILFIRNKIFS LCVGKKKHAF
WGRDTISPIE SQVSNIFIPN DFPQSGDETY NLYKSFHFPS RSDPFVRRAI YSIADISGTP
LTEGQIVNFE RTYCQPLSDM NLSDSEGKNL HQYLNFNSNM GLIHTPCSEK DLSSEKRKKW
SLCLKKCVEK GQMYRTFQRD SAFSTLSKWN LFQTYMPWFL TSTGYKYLNL IFLDTFSDLL
PILSSSQKFV SIFPDIMHGS GISWRILQKK LCLPQWNLIS EISSKCLHNL LLSEEMIHRN
NESPLISTHL RSPNAREFLY SILFLLLVAG YLVRTHLLFV SRASSELQTE FEKVKSLMIP
SSMIELRKLL DRYPTSEPNS FWLKNLFLVA LEQLGDSLEE IRGSASGGNM LGPAYGVKSI
RSKKKDWNIN LIEIIDLIPN PINRITFSRN TRHLSHTSKE IYSLIRKRKN VNGDWIDEKI
ESWVANSDSI DDEEREFLVQ FSTLTTENRI DQILLSLTHS DHLSKNDSGY QMIEQPGAIY
LRYLVDIHKK HLMNYEFNPS CLAERRIFLA HYQTITYSQT SCGENSFHFP SPGKPFSLRL
ALSPSRGILV IGSIGTGRSY LVKYLATNSY VPFITVFLNK FLDNKSKGFL LDEIDIDDSD
DIDDSDNLDA SDDIDRDLDT ELELLTRMNG LTVDMMPEID RFYITLQFEL AKAMSPCIIW
IPNIHDLDVN ESNDLSLGLL VNHLSRDCER CSTRNILVIA STHIPQKVDP ALIAPNKLNT
CIKIRRLLIP QQRKHFFTLS YTRGFHLEKK MFHTNGFGSI TMGSNARDLV ALTNEVLSIS
ITQKKSIIDT NTIRSALHRQ TWDLRSQVRS VQDHGILFYQ IGRAVAQNVL LSNCPIDPIS
IYMKKKSCNE GDSYLYKWYF ELGTSMKRLT ILLYLLSCSA GSVAQDLWSL SVPDEKNGIT
SYGLVENDSD LVHGLLEVEG ALVGSSRTEK DCSQFDNDRV TLLLRPEPRN PLDMMQKGSW
SILDQRFLYE KYESEFEEGE GEGALDPQED LFNHIVWAPR IWRPWGFLFD CIERPNELGF
PYWSRSFRGK RIIYDEEDEL QENDSGFLQS GTMQYQTRDR SQGLFRISQF IWDPADPLFF
LFKDQPPGSV FSHRELFADE EMSKGLLTSQ TDPPTSIYKR WFIKNTQEKH FELLINRQRW
LRTNSSLSNG SFRSNTLSES YQYLSNLFLS NGTLLDQMPK TLLRKRWLFP DEMKIGFM
