YCF3_CHLRE
ID YCF3_CHLRE Reviewed; 172 AA.
AC O20031;
DT 29-AUG-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 03-AUG-2022, entry version 116.
DE RecName: Full=Photosystem I assembly protein Ycf3 {ECO:0000255|HAMAP-Rule:MF_00439};
GN Name=ycf3 {ECO:0000255|HAMAP-Rule:MF_00439};
OS Chlamydomonas reinhardtii (Chlamydomonas smithii).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.
OX NCBI_TaxID=3055;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND CHARACTERIZATION.
RX PubMed=9321389; DOI=10.1093/emboj/16.20.6095;
RA Boudreau E., Takahashi Y., Lemieux C., Turmel M., Rochaix J.-D.;
RT "The chloroplast ycf3 and ycf4 open reading frames of Chlamydomonas
RT reinhardtii are required for the accumulation of the photosystem I
RT complex.";
RL EMBO J. 16:6095-6104(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CC-503;
RX PubMed=19473533; DOI=10.1186/1471-2148-9-120;
RA Smith D.R., Lee R.W.;
RT "Nucleotide diversity of the Chlamydomonas reinhardtii plastid genome:
RT addressing the mutational-hazard hypothesis.";
RL BMC Evol. Biol. 9:120-120(2009).
RN [3]
RP IDENTIFICATION, AND COMPLETE PLASTID GENOME.
RX PubMed=12417694; DOI=10.1105/tpc.006155;
RA Maul J.E., Lilly J.W., Cui L., dePamphilis C.W., Miller W., Harris E.H.,
RA Stern D.B.;
RT "The Chlamydomonas reinhardtii plastid chromosome: islands of genes in a
RT sea of repeats.";
RL Plant Cell 14:2659-2679(2002).
CC -!- FUNCTION: Essential for the assembly of the photosystem I (PSI)
CC complex. May act as a chaperone-like factor to guide the assembly of
CC the PSI subunits. {ECO:0000269|PubMed:9321389}.
CC -!- INTERACTION:
CC O20031; P12154: psaA; NbExp=3; IntAct=EBI-601871, EBI-601796;
CC O20031; Q39615: psaD; NbExp=4; IntAct=EBI-601871, EBI-601809;
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC {ECO:0000255|HAMAP-Rule:MF_00439}; Peripheral membrane protein
CC {ECO:0000255|HAMAP-Rule:MF_00439}.
CC -!- SIMILARITY: Belongs to the Ycf3 family. {ECO:0000255|HAMAP-
CC Rule:MF_00439}.
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DR EMBL; Y13655; CAA74008.1; -; Genomic_DNA.
DR EMBL; FJ423446; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BK000554; DAA00938.1; -; Genomic_DNA.
DR PIR; T07996; T07996.
DR RefSeq; NP_958393.1; NC_005353.1.
DR AlphaFoldDB; O20031; -.
DR SMR; O20031; -.
DR IntAct; O20031; 6.
DR STRING; 3055.DAA00938; -.
DR PaxDb; O20031; -.
DR PRIDE; O20031; -.
DR GeneID; 2717008; -.
DR KEGG; cre:ChreCp037; -.
DR eggNOG; KOG1124; Eukaryota.
DR HOGENOM; CLU_141248_0_0_1; -.
DR InParanoid; O20031; -.
DR OrthoDB; 1270285at2759; -.
DR BioCyc; MetaCyc:MON-16598; -.
DR Proteomes; UP000006906; Chloroplast.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009579; C:thylakoid; IDA:UniProtKB.
DR GO; GO:0048564; P:photosystem I assembly; IDA:UniProtKB.
DR Gene3D; 1.25.40.10; -; 1.
DR HAMAP; MF_00439; Ycf3; 1.
DR InterPro; IPR022818; PSI_Ycf3_assembly.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR001440; TPR_1.
DR InterPro; IPR019734; TPR_repeat.
DR Pfam; PF00515; TPR_1; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF48452; SSF48452; 1.
DR PROSITE; PS50005; TPR; 3.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 1: Evidence at protein level;
KW Chloroplast; Membrane; Photosynthesis; Plastid; Reference proteome; Repeat;
KW Thylakoid; TPR repeat.
FT CHAIN 1..172
FT /note="Photosystem I assembly protein Ycf3"
FT /id="PRO_0000217797"
FT REPEAT 35..68
FT /note="TPR 1"
FT REPEAT 72..105
FT /note="TPR 2"
FT REPEAT 120..153
FT /note="TPR 3"
SQ SEQUENCE 172 AA; 19810 MW; B91D933BDDC2363B CRC64;
MPRTQRNDNF IDKTFTVVAD ILLKVLPTSQ REKQAFSYYR NGMSAQAEGE YAEALQNYYE
AMRLEVDAYD RSYILYNIGL IHTSNGEHGR ALEYYYQALE RNPSLSSALN NIAVIYHYRG
EQAIENGQSE ISQILFEKAA DYWKEAIRLA PTNYIEALNW LKMTGRLTGL AT