YCF4_ORYSJ
ID YCF4_ORYSJ Reviewed; 185 AA.
AC P0C515; P12206; Q6QXT9; Q6QY66;
DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 12-JUN-2007, sequence version 1.
DT 03-AUG-2022, entry version 70.
DE RecName: Full=Photosystem I assembly protein Ycf4 {ECO:0000255|HAMAP-Rule:MF_00437};
GN Name=ycf4 {ECO:0000255|HAMAP-Rule:MF_00437};
GN OrderedLocusNames=LOC_Osp1g00460; ORFNames=Nip069;
OS Oryza sativa subsp. japonica (Rice).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=2770692; DOI=10.1007/bf02464880;
RA Hiratsuka J., Shimada H., Whittier R., Ishibashi T., Sakamoto M., Mori M.,
RA Kondo C., Honji Y., Sun C.-R., Meng B.-Y., Li Y.-Q., Kanno A.,
RA Nishizawa Y., Hirai A., Shinozaki K., Sugiura M.;
RT "The complete sequence of the rice (Oryza sativa) chloroplast genome:
RT intermolecular recombination between distinct tRNA genes accounts for a
RT major plastid DNA inversion during the evolution of the cereals.";
RL Mol. Gen. Genet. 217:185-194(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15122023; DOI=10.1104/pp.103.031245;
RA Tang J., Xia H., Cao M., Zhang X., Zeng W., Hu S., Tong W., Wang J.,
RA Wang J., Yu J., Yang H., Zhu L.;
RT "A comparison of rice chloroplast genomes.";
RL Plant Physiol. 135:412-420(2004).
CC -!- FUNCTION: Seems to be required for the assembly of the photosystem I
CC complex. {ECO:0000255|HAMAP-Rule:MF_00437}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC {ECO:0000255|HAMAP-Rule:MF_00437}; Multi-pass membrane protein
CC {ECO:0000255|HAMAP-Rule:MF_00437}.
CC -!- SIMILARITY: Belongs to the Ycf4 family. {ECO:0000255|HAMAP-
CC Rule:MF_00437}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAS46129.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; X15901; CAA33958.1; -; Genomic_DNA.
DR EMBL; AY522330; AAS46129.1; ALT_INIT; Genomic_DNA.
DR PIR; S05116; S05116.
DR RefSeq; NP_039396.1; NC_001320.1.
DR AlphaFoldDB; P0C515; -.
DR STRING; 39947.P0C515; -.
DR PaxDb; P0C515; -.
DR PRIDE; P0C515; -.
DR GeneID; 3131468; -.
DR KEGG; osa:3131468; -.
DR InParanoid; P0C515; -.
DR OrthoDB; 1340066at2759; -.
DR Proteomes; UP000059680; Chloroplast.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0009522; C:photosystem I; IEA:InterPro.
DR GO; GO:0009536; C:plastid; IC:Gramene.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00437; Ycf4; 1.
DR InterPro; IPR003359; PSI_Ycf4_assembly.
DR Pfam; PF02392; Ycf4; 1.
PE 3: Inferred from homology;
KW Chloroplast; Membrane; Photosynthesis; Plastid; Reference proteome;
KW Thylakoid; Transmembrane; Transmembrane helix.
FT CHAIN 1..185
FT /note="Photosystem I assembly protein Ycf4"
FT /id="PRO_0000290106"
FT TRANSMEM 21..43
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00437"
FT TRANSMEM 63..85
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00437"
SQ SEQUENCE 185 AA; 21595 MW; 8A21FD9AD11BA29E CRC64;
MNWRSEHIWI ELLKGSRKRG NFFWACILFL GSLGFLAVGA SSYLGKNIIS VLPSQQILFF
PQGVVMSFYG IAGLFISAYL WCTILWNVGS GYDRFDRKEG VVCIFRWGFP GIKRRVFLRF
LMRDIQSIRI QVKEGLFPRR ILYMEIRGQG AIPLTRTDEK FFTPREIEQK AAELAYFLRI
PMEVF