YCF4_SOLLC
ID YCF4_SOLLC Reviewed; 184 AA.
AC Q2MI89;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 07-FEB-2006, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Photosystem I assembly protein Ycf4 {ECO:0000255|HAMAP-Rule:MF_00437};
GN Name=ycf4 {ECO:0000255|HAMAP-Rule:MF_00437};
OS Solanum lycopersicum (Tomato) (Lycopersicon esculentum).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC Solanum subgen. Lycopersicon.
OX NCBI_TaxID=4081;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. LA3023;
RX PubMed=16575560; DOI=10.1007/s00122-006-0254-x;
RA Daniell H., Lee S.-B., Grevich J., Saski C., Quesada-Vargas T., Guda C.,
RA Tomkins J., Jansen R.K.;
RT "Complete chloroplast genome sequences of Solanum bulbocastanum, Solanum
RT lycopersicum and comparative analyses with other Solanaceae genomes.";
RL Theor. Appl. Genet. 112:1503-1518(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. IPA-6;
RX PubMed=16830097; DOI=10.1007/s00239-005-0254-5;
RA Kahlau S., Aspinall S., Gray J.C., Bock R.;
RT "Sequence of the tomato chloroplast DNA and evolutionary comparison of
RT solanaceous plastid genomes.";
RL J. Mol. Evol. 63:194-207(2006).
CC -!- FUNCTION: Seems to be required for the assembly of the photosystem I
CC complex. {ECO:0000255|HAMAP-Rule:MF_00437}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
CC {ECO:0000255|HAMAP-Rule:MF_00437}; Multi-pass membrane protein
CC {ECO:0000255|HAMAP-Rule:MF_00437}.
CC -!- SIMILARITY: Belongs to the Ycf4 family. {ECO:0000255|HAMAP-
CC Rule:MF_00437}.
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DR EMBL; DQ347959; ABC56311.1; -; Genomic_DNA.
DR EMBL; AM087200; CAJ32404.1; -; Genomic_DNA.
DR RefSeq; AP_004939.1; AC_000188.1.
DR RefSeq; YP_008563099.1; NC_007898.3.
DR AlphaFoldDB; Q2MI89; -.
DR STRING; 4081.Solyc01g007360.2.1; -.
DR PaxDb; Q2MI89; -.
DR PRIDE; Q2MI89; -.
DR GeneID; 3950385; -.
DR KEGG; sly:3950385; -.
DR eggNOG; ENOG502QWGG; Eukaryota.
DR HOGENOM; CLU_095465_0_0_1; -.
DR InParanoid; Q2MI89; -.
DR OrthoDB; 1340066at2759; -.
DR PhylomeDB; Q2MI89; -.
DR Proteomes; UP000004994; Chloroplast.
DR ExpressionAtlas; Q2MI89; baseline.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0009522; C:photosystem I; IEA:InterPro.
DR GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00437; Ycf4; 1.
DR InterPro; IPR003359; PSI_Ycf4_assembly.
DR Pfam; PF02392; Ycf4; 1.
PE 3: Inferred from homology;
KW Chloroplast; Membrane; Photosynthesis; Plastid; Reference proteome;
KW Thylakoid; Transmembrane; Transmembrane helix.
FT CHAIN 1..184
FT /note="Photosystem I assembly protein Ycf4"
FT /id="PRO_0000275672"
FT TRANSMEM 19..39
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00437"
FT TRANSMEM 57..77
FT /note="Helical"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00437"
SQ SEQUENCE 184 AA; 21388 MW; 4156CB95A0FD2663 CRC64;
MTWRSDDIWI ELITGSRKIS NFCWALILFL GSLGFLLVGT SSYLGRNLLS FFPPQQIIFF
PQGIVMSFYG IAGLFISSYL WCTISWNVGS GYDRFDRKEG IVCIFRWGFP GKNRRIFLRF
LIKDIQSVRI EVKEGIYARR VLYMDIRGQG SIPLTRTDEN LTPREIEQKA AELAYFLRVP
IEVF