YCFJ_ECOLI
ID YCFJ_ECOLI Reviewed; 179 AA.
AC P0AB35; P37796; P75951;
DT 11-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2005, sequence version 1.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Uncharacterized protein YcfJ;
GN Name=ycfJ; OrderedLocusNames=b1110, JW1096;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-63.
RC STRAIN=K12;
RX PubMed=6265208; DOI=10.1111/j.1432-1033.1981.tb05314.x;
RA Young J.G., Rogers B.L., Campbell H.D., Jaworowski A., Shaw D.C.;
RT "Nucleotide sequence coding for the respiratory NADH dehydrogenase of
RT Escherichia coli. UUG initiation codon.";
RL Eur. J. Biochem. 116:165-170(1981).
RN [5]
RP IDENTIFICATION.
RX PubMed=7984428; DOI=10.1093/nar/22.22.4756;
RA Borodovsky M., Rudd K.E., Koonin E.V.;
RT "Intrinsic and extrinsic approaches for detecting genes in a bacterial
RT genome.";
RL Nucleic Acids Res. 22:4756-4767(1994).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- SIMILARITY: To Rickettsia 17 kDa surface antigen. {ECO:0000305}.
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DR EMBL; U00096; AAC74194.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA35925.1; -; Genomic_DNA.
DR EMBL; V00306; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PIR; C64855; C64855.
DR RefSeq; NP_415628.1; NC_000913.3.
DR RefSeq; WP_001043459.1; NZ_STEB01000016.1.
DR AlphaFoldDB; P0AB35; -.
DR BioGRID; 4263207; 13.
DR IntAct; P0AB35; 1.
DR STRING; 511145.b1110; -.
DR PaxDb; P0AB35; -.
DR PRIDE; P0AB35; -.
DR EnsemblBacteria; AAC74194; AAC74194; b1110.
DR EnsemblBacteria; BAA35925; BAA35925; BAA35925.
DR GeneID; 66670624; -.
DR GeneID; 945977; -.
DR KEGG; ecj:JW1096; -.
DR KEGG; eco:b1110; -.
DR PATRIC; fig|511145.12.peg.1154; -.
DR EchoBASE; EB2338; -.
DR eggNOG; COG3134; Bacteria.
DR HOGENOM; CLU_094245_1_0_6; -.
DR InParanoid; P0AB35; -.
DR OMA; PREVCKD; -.
DR PhylomeDB; P0AB35; -.
DR BioCyc; EcoCyc:EG12444-MON; -.
DR PRO; PR:P0AB35; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0019867; C:outer membrane; IEA:InterPro.
DR GO; GO:1900190; P:regulation of single-species biofilm formation; IMP:EcoCyc.
DR InterPro; IPR008816; Gly_zipper_2TM_dom.
DR Pfam; PF05433; Rick_17kDa_Anti; 1.
PE 4: Predicted;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..179
FT /note="Uncharacterized protein YcfJ"
FT /id="PRO_0000168832"
FT TRANSMEM 5..25
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 179 AA; 18920 MW; BA5EB0DB56D45609 CRC64;
MNKSMLAGIG IGVAAALGVA AVASLNVFER GPQYAQVVSA TPIKETVKTP RQECRNVTVT
HRRPVQDENR ITGSVLGAVA GGVIGHQFGG GRGKDVATVV GALGGGYAGN QIQGSLQESD
TYTTTQQRCK TVYDKSEKML GYDVTYKIGD QQGKIRMDRD PGTQIPLDSN GQLILNNKV
