YCIH_ECOLI
ID YCIH_ECOLI Reviewed; 108 AA.
AC P08245; P76033;
DT 01-AUG-1988, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1988, sequence version 1.
DT 03-AUG-2022, entry version 159.
DE RecName: Full=Uncharacterized protein YciH;
GN Name=yciH; OrderedLocusNames=b1282, JW1274;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12;
RX PubMed=2956254; DOI=10.1016/s0021-9258(18)61103-2;
RA Turnbough C.L. Jr., Kerr K.H., Funderburg W.R., Donahue J.P., Powell F.E.;
RT "Nucleotide sequence and characterization of the pyrF operon of Escherichia
RT coli K12.";
RL J. Biol. Chem. 262:10239-10245(1987).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9097039; DOI=10.1093/dnares/3.6.363;
RA Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., Makino K.,
RA Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S.,
RA Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G.,
RA Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Takeuchi Y.,
RA Wada C., Yamamoto Y., Horiuchi T.;
RT "A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 28.0-40.1 min region on the linkage map.";
RL DNA Res. 3:363-377(1996).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP STRUCTURE BY NMR.
RX PubMed=10497266; DOI=10.1093/nar/27.20.4018;
RA Cort J.R., Koonin E.V., Bash P.A., Kennedy M.A.;
RT "A phylogenetic approach to target selection for structural genomics:
RT solution structure of YciH.";
RL Nucleic Acids Res. 27:4018-4027(1999).
CC -!- SIMILARITY: Belongs to the SUI1 family. {ECO:0000305}.
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DR EMBL; J02768; AAA24484.1; -; Genomic_DNA.
DR EMBL; U00096; AAC74364.2; -; Genomic_DNA.
DR EMBL; AP009048; BAA14836.1; -; Genomic_DNA.
DR PIR; E64876; Q3ECPF.
DR RefSeq; NP_415798.2; NC_000913.3.
DR RefSeq; WP_001295580.1; NZ_STEB01000005.1.
DR PDB; 1D1R; NMR; -; A=1-108.
DR PDBsum; 1D1R; -.
DR AlphaFoldDB; P08245; -.
DR SMR; P08245; -.
DR BioGRID; 4259544; 43.
DR DIP; DIP-11582N; -.
DR IntAct; P08245; 48.
DR STRING; 511145.b1282; -.
DR jPOST; P08245; -.
DR PaxDb; P08245; -.
DR PRIDE; P08245; -.
DR EnsemblBacteria; AAC74364; AAC74364; b1282.
DR EnsemblBacteria; BAA14836; BAA14836; BAA14836.
DR GeneID; 66674893; -.
DR GeneID; 947058; -.
DR KEGG; ecj:JW1274; -.
DR KEGG; eco:b1282; -.
DR PATRIC; fig|1411691.4.peg.998; -.
DR EchoBASE; EB1118; -.
DR eggNOG; COG0023; Bacteria.
DR HOGENOM; CLU_082805_4_0_6; -.
DR InParanoid; P08245; -.
DR OMA; KSKCGVG; -.
DR PhylomeDB; P08245; -.
DR BioCyc; EcoCyc:EG11128-MON; -.
DR EvolutionaryTrace; P08245; -.
DR PRO; PR:P08245; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0043024; F:ribosomal small subunit binding; IDA:EcoCyc.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:InterPro.
DR GO; GO:0001731; P:formation of translation preinitiation complex; IBA:GO_Central.
DR GO; GO:0002188; P:translation reinitiation; IBA:GO_Central.
DR CDD; cd11567; YciH_like; 1.
DR DisProt; DP00790; -.
DR InterPro; IPR001950; SUI1.
DR InterPro; IPR005872; SUI1_arc_bac.
DR InterPro; IPR036877; SUI1_dom_sf.
DR Pfam; PF01253; SUI1; 1.
DR PIRSF; PIRSF037511; Transl_init_SUI1_pro; 1.
DR SUPFAM; SSF55159; SSF55159; 1.
DR TIGRFAMs; TIGR01158; SUI1_rel; 1.
DR PROSITE; PS50296; SUI1; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Protein biosynthesis; Reference proteome;
KW Translation regulation.
FT CHAIN 1..108
FT /note="Uncharacterized protein YciH"
FT /id="PRO_0000130595"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT STRAND 32..37
FT /evidence="ECO:0007829|PDB:1D1R"
FT STRAND 41..44
FT /evidence="ECO:0007829|PDB:1D1R"
FT STRAND 48..51
FT /evidence="ECO:0007829|PDB:1D1R"
FT HELIX 57..67
FT /evidence="ECO:0007829|PDB:1D1R"
FT STRAND 70..73
FT /evidence="ECO:0007829|PDB:1D1R"
FT STRAND 82..84
FT /evidence="ECO:0007829|PDB:1D1R"
FT HELIX 89..99
FT /evidence="ECO:0007829|PDB:1D1R"
SQ SEQUENCE 108 AA; 11396 MW; AEE2EFE7CEF1BE16 CRC64;
MSDSNSRLVY STETGRIDEP KAAPVRPKGD GVVRIQRQTS GRKGKGVCLI TGVDLDDAEL
TKLAAELKKK CGCGGAVKDG VIEIQGDKRD LLKSLLEAKG MKVKLAGG