YCIN_ECOLI
ID YCIN_ECOLI Reviewed; 83 AA.
AC P0AB61; P46132; P77447;
DT 11-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2005, sequence version 1.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Protein YciN;
GN Name=yciN; OrderedLocusNames=b1273, JW1265;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=3029379; DOI=10.1016/0022-2836(86)90129-4;
RA Tse-Dinh Y.-C., Wang J.C.;
RT "Complete nucleotide sequence of the topA gene encoding Escherichia coli
RT DNA topoisomerase I.";
RL J. Mol. Biol. 191:321-331(1986).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9097039; DOI=10.1093/dnares/3.6.363;
RA Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., Makino K.,
RA Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S.,
RA Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G.,
RA Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Takeuchi Y.,
RA Wada C., Yamamoto Y., Horiuchi T.;
RT "A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 28.0-40.1 min region on the linkage map.";
RL DNA Res. 3:363-377(1996).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP PROTEIN SEQUENCE OF 1-9.
RC STRAIN=K12;
RX PubMed=9868784; DOI=10.1111/j.1574-6968.1998.tb13343.x;
RA Wasinger V.C., Humphery-Smith I.;
RT "Small genes/gene-products in Escherichia coli K-12.";
RL FEMS Microbiol. Lett. 169:375-382(1998).
RN [6]
RP IDENTIFICATION.
RX PubMed=7567469; DOI=10.1093/nar/23.17.3554;
RA Borodovsky M., McIninch J., Koonin E.V., Rudd K.E., Medigue C., Danchin A.;
RT "Detection of new genes in a bacterial genome using Markov models for three
RT gene classes.";
RL Nucleic Acids Res. 23:3554-3562(1995).
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DR EMBL; X04475; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; U00096; AAC74355.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA14810.1; -; Genomic_DNA.
DR PIR; D64875; D64875.
DR RefSeq; NP_415789.1; NC_000913.3.
DR RefSeq; WP_001031530.1; NZ_STEB01000005.1.
DR AlphaFoldDB; P0AB61; -.
DR SMR; P0AB61; -.
DR BioGRID; 4259578; 4.
DR DIP; DIP-35851N; -.
DR IntAct; P0AB61; 10.
DR STRING; 511145.b1273; -.
DR jPOST; P0AB61; -.
DR PaxDb; P0AB61; -.
DR PRIDE; P0AB61; -.
DR DNASU; 945860; -.
DR EnsemblBacteria; AAC74355; AAC74355; b1273.
DR EnsemblBacteria; BAA14810; BAA14810; BAA14810.
DR GeneID; 67417407; -.
DR GeneID; 945860; -.
DR KEGG; ecj:JW1265; -.
DR KEGG; eco:b1273; -.
DR PATRIC; fig|1411691.4.peg.1011; -.
DR EchoBASE; EB2709; -.
DR eggNOG; ENOG5032SBA; Bacteria.
DR HOGENOM; CLU_164128_0_0_6; -.
DR InParanoid; P0AB61; -.
DR OMA; DYLHGMV; -.
DR PhylomeDB; P0AB61; -.
DR BioCyc; EcoCyc:EG12868-MON; -.
DR PRO; PR:P0AB61; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0005829; C:cytosol; IDA:EcoCyc.
DR Gene3D; 3.30.300.360; -; 1.
DR InterPro; IPR019633; DUF2498.
DR InterPro; IPR038191; YciN_sf.
DR Pfam; PF10692; DUF2498; 1.
PE 1: Evidence at protein level;
KW Direct protein sequencing; Reference proteome.
FT CHAIN 1..83
FT /note="Protein YciN"
FT /id="PRO_0000168880"
FT CONFLICT 43..83
FT /note="LVFTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD -> RYLPATT
FT F (in Ref. 1)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 83 AA; 9386 MW; 558ACD3DD8DFFCA4 CRC64;
MNKETQPIDR ETLLKEANKI IREHEDTLAG IEATGVTQRN GVLVFTGDYF LDEQGLPTAK
STAVFNMFKH LAHVLSEKYH LVD
