YCIT_ECOLI
ID YCIT_ECOLI Reviewed; 249 AA.
AC P76034; P76837;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 152.
DE RecName: Full=Uncharacterized HTH-type transcriptional regulator YciT;
GN Name=yciT; OrderedLocusNames=b1284, JW1276;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9097039; DOI=10.1093/dnares/3.6.363;
RA Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., Makino K.,
RA Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S.,
RA Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G.,
RA Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Takeuchi Y.,
RA Wada C., Yamamoto Y., Horiuchi T.;
RT "A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 28.0-40.1 min region on the linkage map.";
RL DNA Res. 3:363-377(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND SEQUENCE REVISION.
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
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DR EMBL; U00096; AAC74366.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA14838.2; -; Genomic_DNA.
DR PIR; G64876; G64876.
DR RefSeq; NP_415800.1; NC_000913.3.
DR RefSeq; WP_001088620.1; NZ_LN832404.1.
DR AlphaFoldDB; P76034; -.
DR SMR; P76034; -.
DR BioGRID; 4260140; 10.
DR BioGRID; 850236; 2.
DR DIP; DIP-11592N; -.
DR IntAct; P76034; 6.
DR STRING; 511145.b1284; -.
DR jPOST; P76034; -.
DR PaxDb; P76034; -.
DR PRIDE; P76034; -.
DR EnsemblBacteria; AAC74366; AAC74366; b1284.
DR EnsemblBacteria; BAA14838; BAA14838; BAA14838.
DR GeneID; 945869; -.
DR KEGG; ecj:JW1276; -.
DR KEGG; eco:b1284; -.
DR PATRIC; fig|1411691.4.peg.996; -.
DR EchoBASE; EB3664; -.
DR eggNOG; COG1349; Bacteria.
DR HOGENOM; CLU_060699_0_1_6; -.
DR InParanoid; P76034; -.
DR OMA; ANYNCDT; -.
DR PhylomeDB; P76034; -.
DR BioCyc; EcoCyc:G6638-MON; -.
DR PRO; PR:P76034; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0005829; C:cytosol; IDA:EcoCyc.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006974; P:cellular response to DNA damage stimulus; IEP:EcoliWiki.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IMP:EcoCyc.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR014036; DeoR_C.
DR InterPro; IPR001034; DeoR_HTH.
DR InterPro; IPR037171; NagB/RpiA_transferase-like.
DR InterPro; IPR018356; Tscrpt_reg_HTH_DeoR_CS.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF00455; DeoRC; 1.
DR Pfam; PF08220; HTH_DeoR; 1.
DR PRINTS; PR00037; HTHLACR.
DR SMART; SM00420; HTH_DEOR; 1.
DR SUPFAM; SSF100950; SSF100950; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR PROSITE; PS00894; HTH_DEOR_1; 1.
DR PROSITE; PS51000; HTH_DEOR_2; 1.
PE 4: Predicted;
KW DNA-binding; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..249
FT /note="Uncharacterized HTH-type transcriptional regulator
FT YciT"
FT /id="PRO_0000050271"
FT DOMAIN 1..56
FT /note="HTH deoR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00349"
FT DNA_BIND 18..37
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00349"
SQ SEQUENCE 249 AA; 27603 MW; EBB5740C92347443 CRC64;
MNSRQQTILQ MVIDQGQVSV TDLAKATGVS EVTIRQDLNT LEKLSYLRRA HGFAVSLDSD
DVETRMMSNY TLKRELAEFA ASLVQPGETI FIENGSSNAL LARTLGEQKK NVTIITVSSY
IAHLLKDAPC EVILLGGVYQ KKSESMVGPL TRQCIQQVHF SKAFIGIDGW QPETGFTGRD
MMRTDVVNAV LEKECEAIVL TDSSKFGAVH SYSIGPVERF NRVITDSKIR ASDLMHLEHS
KLTIHVVDI
