YCKB_BACSU
ID YCKB_BACSU Reviewed; 287 AA.
AC P42400; O31476;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 30-MAY-2000, sequence version 2.
DT 03-AUG-2022, entry version 135.
DE RecName: Full=Probable ABC transporter extracellular-binding protein YckB;
DE AltName: Full=ORF2;
DE Flags: Precursor;
GN Name=yckB; OrderedLocusNames=BSU03380;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168;
RX PubMed=7704255; DOI=10.1099/13500872-141-2-277;
RA Fujishima Y., Yamane K.;
RT "A 10 kb nucleotide sequence at the 5' flanking region (32 degrees) of
RT srfAA of the Bacillus subtilis chromosome.";
RL Microbiology 141:277-279(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
CC -!- FUNCTION: Probably part of a binding-protein-dependent transport
CC system.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Lipid-anchor
CC {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 3 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA06426.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; D30762; BAA06426.1; ALT_FRAME; Genomic_DNA.
DR EMBL; AL009126; CAB12132.1; -; Genomic_DNA.
DR PIR; D69760; D69760.
DR RefSeq; NP_388220.1; NC_000964.3.
DR RefSeq; WP_009966510.1; NZ_JNCM01000030.1.
DR PDB; 2IEE; X-ray; 2.20 A; A/B=26-287.
DR PDBsum; 2IEE; -.
DR AlphaFoldDB; P42400; -.
DR SMR; P42400; -.
DR STRING; 224308.BSU03380; -.
DR jPOST; P42400; -.
DR PaxDb; P42400; -.
DR PRIDE; P42400; -.
DR EnsemblBacteria; CAB12132; CAB12132; BSU_03380.
DR GeneID; 938320; -.
DR KEGG; bsu:BSU03380; -.
DR PATRIC; fig|224308.43.peg.347; -.
DR eggNOG; COG0834; Bacteria.
DR InParanoid; P42400; -.
DR OMA; LYPTSYH; -.
DR PhylomeDB; P42400; -.
DR BioCyc; BSUB:BSU03380-MON; -.
DR EvolutionaryTrace; P42400; -.
DR Proteomes; UP000001570; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR018313; SBP_3_CS.
DR InterPro; IPR001638; Solute-binding_3/MltF_N.
DR Pfam; PF00497; SBP_bac_3; 1.
DR SMART; SM00062; PBPb; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
DR PROSITE; PS01039; SBP_BACTERIAL_3; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cell membrane; Lipoprotein; Membrane; Palmitate;
KW Reference proteome; Signal; Transport.
FT SIGNAL 1..24
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT CHAIN 25..287
FT /note="Probable ABC transporter extracellular-binding
FT protein YckB"
FT /id="PRO_0000031777"
FT LIPID 25
FT /note="N-palmitoyl cysteine"
FT /evidence="ECO:0000305"
FT LIPID 25
FT /note="S-diacylglycerol cysteine"
FT /evidence="ECO:0000305"
FT HELIX 38..44
FT /evidence="ECO:0007829|PDB:2IEE"
FT STRAND 46..51
FT /evidence="ECO:0007829|PDB:2IEE"
FT TURN 56..58
FT /evidence="ECO:0007829|PDB:2IEE"
FT STRAND 59..61
FT /evidence="ECO:0007829|PDB:2IEE"
FT TURN 63..66
FT /evidence="ECO:0007829|PDB:2IEE"
FT HELIX 73..84
FT /evidence="ECO:0007829|PDB:2IEE"
FT STRAND 88..93
FT /evidence="ECO:0007829|PDB:2IEE"
FT HELIX 99..104
FT /evidence="ECO:0007829|PDB:2IEE"
FT STRAND 107..111
FT /evidence="ECO:0007829|PDB:2IEE"
FT HELIX 119..122
FT /evidence="ECO:0007829|PDB:2IEE"
FT STRAND 125..127
FT /evidence="ECO:0007829|PDB:2IEE"
FT STRAND 131..140
FT /evidence="ECO:0007829|PDB:2IEE"
FT TURN 142..144
FT /evidence="ECO:0007829|PDB:2IEE"
FT HELIX 145..147
FT /evidence="ECO:0007829|PDB:2IEE"
FT HELIX 151..154
FT /evidence="ECO:0007829|PDB:2IEE"
FT STRAND 158..161
FT /evidence="ECO:0007829|PDB:2IEE"
FT HELIX 166..173
FT /evidence="ECO:0007829|PDB:2IEE"
FT STRAND 177..180
FT /evidence="ECO:0007829|PDB:2IEE"
FT HELIX 186..194
FT /evidence="ECO:0007829|PDB:2IEE"
FT STRAND 200..204
FT /evidence="ECO:0007829|PDB:2IEE"
FT HELIX 205..214
FT /evidence="ECO:0007829|PDB:2IEE"
FT STRAND 228..233
FT /evidence="ECO:0007829|PDB:2IEE"
FT STRAND 236..238
FT /evidence="ECO:0007829|PDB:2IEE"
FT HELIX 242..257
FT /evidence="ECO:0007829|PDB:2IEE"
FT HELIX 260..268
FT /evidence="ECO:0007829|PDB:2IEE"
FT TURN 269..271
FT /evidence="ECO:0007829|PDB:2IEE"
SQ SEQUENCE 287 AA; 31720 MW; 38E1462D5CCBD2BB CRC64;
MKSFMHSKAV IFSFTMAFFL ILAACSGKNE ADSKDTGWEQ IKDKGKIVVA TSGTLYPTSY
HDTDSGSDKL TGYEVEVVRE AAKRLGLKVE FKEMGIDGML TAVNSGQVDA AANDIDVTKD
REEKFAFSTP YKYSYGTAIV RKDDLSGIKT LKDLKGKKAA GAATTVYMEV ARKYGAKEVI
YDNATNEQYL KDVANGRTDV ILNDYYLQTL ALAAFPDLNI TIHPDIKYMP NKQALVMKKS
NAALQKKMNE ALKEMSKDGS LTKLSKQFFN KADVSKKIDA DVQDVDL
