CB050_BOVIN
ID CB050_BOVIN Reviewed; 157 AA.
AC Q1JPL0; A6QQ13;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 23-OCT-2007, sequence version 2.
DT 03-AUG-2022, entry version 72.
DE RecName: Full=Uncharacterized protein C2orf50 homolog;
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RX PubMed=16305752; DOI=10.1186/1471-2164-6-166;
RA Harhay G.P., Sonstegard T.S., Keele J.W., Heaton M.P., Clawson M.L.,
RA Snelling W.M., Wiedmann R.T., Van Tassell C.P., Smith T.P.L.;
RT "Characterization of 954 bovine full-CDS cDNA sequences.";
RL BMC Genomics 6:166-166(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hereford;
RX PubMed=19390049; DOI=10.1126/science.1169588;
RG The bovine genome sequencing and analysis consortium;
RT "The genome sequence of taurine cattle: a window to ruminant biology and
RT evolution.";
RL Science 324:522-528(2009).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3).
RC STRAIN=Hereford; TISSUE=Hypothalamus;
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=3;
CC Name=1;
CC IsoId=Q1JPL0-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q1JPL0-2; Sequence=VSP_028837;
CC Name=3;
CC IsoId=Q1JPL0-3; Sequence=VSP_028835, VSP_028836;
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DR EMBL; BT025343; ABF57299.1; -; mRNA.
DR EMBL; BC149591; AAI49592.1; -; mRNA.
DR RefSeq; NP_001068948.2; NM_001075480.2. [Q1JPL0-1]
DR RefSeq; NP_001244018.1; NM_001257089.1. [Q1JPL0-3]
DR AlphaFoldDB; Q1JPL0; -.
DR PaxDb; Q1JPL0; -.
DR PRIDE; Q1JPL0; -.
DR Ensembl; ENSBTAT00000055980; ENSBTAP00000051155; ENSBTAG00000001903. [Q1JPL0-3]
DR GeneID; 510955; -.
DR KEGG; bta:510955; -.
DR CTD; 113576242; -.
DR VEuPathDB; HostDB:ENSBTAG00000001903; -.
DR eggNOG; ENOG502S2T8; Eukaryota.
DR GeneTree; ENSGT00940000154459; -.
DR HOGENOM; CLU_101818_0_0_1; -.
DR InParanoid; Q1JPL0; -.
DR OrthoDB; 1456634at2759; -.
DR TreeFam; TF329466; -.
DR Proteomes; UP000009136; Chromosome 11.
DR Bgee; ENSBTAG00000001903; Expressed in olfactory segment of nasal mucosa and 60 other tissues.
DR ExpressionAtlas; Q1JPL0; baseline.
PE 2: Evidence at transcript level;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..157
FT /note="Uncharacterized protein C2orf50 homolog"
FT /id="PRO_0000307801"
FT REGION 1..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 92..124
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 92..106
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 83..87
FT /note="QNWSF -> TRRSP (in isoform 3)"
FT /evidence="ECO:0000303|Ref.3"
FT /id="VSP_028835"
FT VAR_SEQ 88..157
FT /note="Missing (in isoform 3)"
FT /evidence="ECO:0000303|Ref.3"
FT /id="VSP_028836"
FT VAR_SEQ 95..157
FT /note="GNKKEPVKLPDHVPRFSDTVPNSTNRAVGSRVDTPLGKTLIGLDFFFVEGAR
FT KKKLEEELQPI -> VRQTMLPSEMLALGVFIHAPHVY (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:16305752"
FT /id="VSP_028837"
SQ SEQUENCE 157 AA; 17301 MW; CF6B362D7FFB63B7 CRC64;
MGSRPTPGLQ RTTSAEYRLP STRPPASVPS TAPGGPVVGR GPTGGPQAPK AKWSALGADG
VQRDQLWREL LEAERRSQQR WAQNWSFLKD YDPMGNKKEP VKLPDHVPRF SDTVPNSTNR
AVGSRVDTPL GKTLIGLDFF FVEGARKKKL EEELQPI
