YDBA_ECOLI
ID YDBA_ECOLI Reviewed; 852 AA.
AC P33666; P76087; P76088; P76856; P76857; P76859;
DT 01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT 27-SEP-2017, sequence version 3.
DT 25-MAY-2022, entry version 101.
DE RecName: Full=Exported protein YdbA;
DE Flags: Precursor;
GN Name=ydbA; OrderedLocusNames=b4492, JW5802/JW1402; ORFNames=b1401/b1405;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9097039; DOI=10.1093/dnares/3.6.363;
RA Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., Makino K.,
RA Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S.,
RA Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G.,
RA Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Takeuchi Y.,
RA Wada C., Yamamoto Y., Horiuchi T.;
RT "A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 28.0-40.1 min region on the linkage map.";
RL DNA Res. 3:363-377(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND SEQUENCE REVISION TO 489
RP AND 495.
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 464-852.
RC STRAIN=K12;
RX PubMed=1665988; DOI=10.1016/0300-9084(91)90166-x;
RA Moszer I., Glaser P., Danchin A.;
RT "Multiple IS insertion sequences near the replication terminus in
RT Escherichia coli K-12.";
RL Biochimie 73:1361-1374(1991).
CC -!- FUNCTION: The full-length protein (which is about 2000 amino acids
CC long) is part of the autotransporter family. {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- MISCELLANEOUS: Missing up to 1200 C-terminal residues compared to
CC orthologs. The gene coding for this protein is interrupted by a hybrid
CC IS2D/IS30C element between amino acids 839 and 840. {ECO:0000305}.
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DR EMBL; U00096; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AP009048; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; X62680; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; P33666; -.
DR SMR; P33666; -.
DR DIP; DIP-11631N; -.
DR IntAct; P33666; 15.
DR PRIDE; P33666; -.
DR EchoBASE; EB1284; -.
DR InParanoid; P33666; -.
DR PhylomeDB; P33666; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
PE 3: Inferred from homology;
KW Reference proteome; Secreted; Signal.
FT SIGNAL 1..21
FT /evidence="ECO:0000255"
FT CHAIN 22..852
FT /note="Exported protein YdbA"
FT /id="PRO_0000168920"
FT REGION 30..50
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 91..145
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 307..354
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 407..449
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 506..531
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 100..124
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 307..347
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 407..443
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 852 AA; 87130 MW; B80CFA3EE8228C01 CRC64;
MQRKTLLSAC IALALSGQGW AADITEVETT TGEKKNTNVT CPADPGKLSP EELKRLPSEC
SPLVEQNLMP WLSTGAAALI TALAVVELND DDDHHHRNNS PLPPTPPDDE SDDTPVPPTP
GGDEIIPDDP DDTPTPPKPV SFNNDVILDK TEKTLTIRDS VFTYTENADG TISLQDSNGR
KATINLWQID EANNTVALEG VSADGATKWQ YNHNGELVIT GDNATVNNNG KTTVDGKDST
GTEINGNNGK VIQDGDLDVS GGGHGIDITG DSATVDNKGT MTVTDPESMG IQIDGDKAIV
NNEGESTITN GGTGTQINGD DATANNNGKT TVDGKDSTGT EINGNNGKVI QDGDLDVSGG
GHGIDITGDS ATVDNKGTMT VTDPESIGIQ VDGDQAVVNN EGESAITNGG TGTQINGDDA
TANNNGKTTV DGKDSTGTEI AGNNGKVIQD GDLDVSGGGH GIDITGDSAT VDNKGTMTVT
DPESIGIQID GDQAIVNNEG ESTITNGGTG TQINGNDATA NNSGKTTVDG KDSTGTKIAG
NIGIVNLDGS LTVTGGAHGV ENIGDNGTVN NKGDIVVSDT GSIGVLINGE GATVSNTGDV
NVSNEATGFS ITTNSGKVSL AGSMQVGDFS TGVDLNGNNN SVTLAAKDLK VVGQKATGIN
VSGDANTVNI TGNVLVDKDK TADNAAEYFF DPSVGINVYG SDNNVTLDGK LTVVSDSEVT
SRQSNLFDGS AEKTSGLVVI GDGNTVNMNG GLELIGEKNA LADGSQVTSL RTGYSYTSVI
VVSGESSVYL NGDTTISGEF PLGFAGVIRV QDKALLEIGS GATLTMQDID SFEHHGTRTL
DLPLYFQTSV IT
