YDBD_ECOLI
ID YDBD_ECOLI Reviewed; 768 AA.
AC P25907; P76089; P76860; P76862;
DT 01-MAY-1992, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 2.
DT 03-AUG-2022, entry version 125.
DE RecName: Full=Uncharacterized protein YdbD;
GN Name=ydbD; OrderedLocusNames=b1407, JW5221;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9097039; DOI=10.1093/dnares/3.6.363;
RA Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., Makino K.,
RA Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S.,
RA Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G.,
RA Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Takeuchi Y.,
RA Wada C., Yamamoto Y., Horiuchi T.;
RT "A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 28.0-40.1 min region on the linkage map.";
RL DNA Res. 3:363-377(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND SEQUENCE REVISION TO
RP 450.
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-350.
RC STRAIN=K12;
RX PubMed=1665988; DOI=10.1016/0300-9084(91)90166-x;
RA Moszer I., Glaser P., Danchin A.;
RT "Multiple IS insertion sequences near the replication terminus in
RT Escherichia coli K-12.";
RL Biochimie 73:1361-1374(1991).
CC -!- SIMILARITY: To E.coli YkiA. {ECO:0000305}.
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DR EMBL; U00096; AAC74489.2; -; Genomic_DNA.
DR EMBL; AP009048; BAA15022.2; -; Genomic_DNA.
DR EMBL; X62680; CAA44554.1; -; Genomic_DNA.
DR PIR; B64892; B64892.
DR RefSeq; NP_415925.2; NC_000913.3.
DR RefSeq; WP_000910026.1; NZ_LN832404.1.
DR AlphaFoldDB; P25907; -.
DR BioGRID; 4263020; 10.
DR BioGRID; 850345; 2.
DR IntAct; P25907; 3.
DR STRING; 511145.b1407; -.
DR PaxDb; P25907; -.
DR PRIDE; P25907; -.
DR EnsemblBacteria; AAC74489; AAC74489; b1407.
DR EnsemblBacteria; BAA15022; BAA15022; BAA15022.
DR GeneID; 945983; -.
DR KEGG; ecj:JW5221; -.
DR KEGG; eco:b1407; -.
DR PATRIC; fig|1411691.4.peg.864; -.
DR EchoBASE; EB1286; -.
DR eggNOG; ENOG5033PQ4; Bacteria.
DR HOGENOM; CLU_027788_0_0_6; -.
DR OMA; MPRNDIW; -.
DR BioCyc; EcoCyc:EG11310-MON; -.
DR PRO; PR:P25907; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR InterPro; IPR024497; DUF2773.
DR Pfam; PF10971; DUF2773; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..768
FT /note="Uncharacterized protein YdbD"
FT /id="PRO_0000168921"
FT CONFLICT 347
FT /note="L -> Y (in Ref. 4; CAA44554)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 768 AA; 86716 MW; A4B01C15871D1DA2 CRC64;
MLKARNCGWI RLLPLFMLSL PVQAELRCVA NAVDIESFFS AATAEDKQQV EQAINSSVNL
VPFGLSASNW KVHRGDLVVE GNIESNQKLI VLGNLTVKGN ISTFSLSNPW VILGNVTATN
IVADSPLLIT GSINASGLVF IDSYYDNPST IKGSINARGI FINDIIAPVV ASSTNSEFMV
RASDKHDTEN VKKALMIINP DAYYWGLIND EDALKEIFKR SNIRMAGNVC NQMKKEALFR
PKPSPELVQE LQMLDEGKVA AFEGRDIATF DLAVMRTLPR LKGISANLRK QLINSNDEQT
IESMARYMPD NEILELTDQQ LGYQPVVLGL LDREPLSVEI MTRMSRLPDG VGPLNLALRE
NLPLDIVMTL AKRDWDMIIQ ELYKDAWLLP ESIIDGYIRS DDSSIRQVGA GGQLTYNQAM
QLANDSSNNV VTSLAFKLAE MKHHGQLLRM TPQESDKVAG YLYQKFENDD DLIRVLFLAL
PDNLQFNFVK RMEKKSPAYF CCRDMQVIHS DAALQRLLTR FNDPEGWSNL AKNQYLSTSM
KQKIWQRALS HRKNNPKADS DAYETSADMI LSELISHGEV DDQMLLNATA LIRSDDWDFL
ESALISWDNL PAVVLKELQQ NTPRNDIWAK FFLRQENSSR AQVDEALRVY YALDPDALAQ
LDVLAKQPDR IWWSTLAKSN LTFFKFGALN NRHTPPAVLA AEIDPEWWIV AMNNPRFPVD
VLKARLKRDP LLALELVNPE LDLVRQLALN GKTRAIREQA MRKLDELY