YDCZ_ECOLI
ID YDCZ_ECOLI Reviewed; 149 AA.
AC P76111; Q2MBB3;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 130.
DE RecName: Full=Inner membrane protein YdcZ;
GN Name=ydcZ; OrderedLocusNames=b1447, JW1442;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- INTERACTION:
CC P76111; P00363: frdA; NbExp=2; IntAct=EBI-550492, EBI-550480;
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
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DR EMBL; U00096; AAC74529.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE76443.1; -; Genomic_DNA.
DR PIR; B64897; B64897.
DR RefSeq; NP_415964.1; NC_000913.3.
DR RefSeq; WP_001076535.1; NZ_STEB01000043.1.
DR AlphaFoldDB; P76111; -.
DR DIP; DIP-11659N; -.
DR IntAct; P76111; 1.
DR STRING; 511145.b1447; -.
DR TCDB; 2.A.7.21.2; the drug/metabolite transporter (dmt) superfamily.
DR PaxDb; P76111; -.
DR EnsemblBacteria; AAC74529; AAC74529; b1447.
DR EnsemblBacteria; BAE76443; BAE76443; BAE76443.
DR GeneID; 66674701; -.
DR GeneID; 946008; -.
DR KEGG; ecj:JW1442; -.
DR KEGG; eco:b1447; -.
DR PATRIC; fig|1411691.4.peg.821; -.
DR EchoBASE; EB3532; -.
DR eggNOG; COG3238; Bacteria.
DR HOGENOM; CLU_111581_0_0_6; -.
DR InParanoid; P76111; -.
DR OMA; ISGYQYV; -.
DR PhylomeDB; P76111; -.
DR BioCyc; EcoCyc:G6758-MON; -.
DR PRO; PR:P76111; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR GO; GO:0071978; P:bacterial-type flagellum-dependent swarming motility; IMP:EcoCyc.
DR InterPro; IPR006750; YdcZ.
DR PANTHER; PTHR34821; PTHR34821; 1.
DR Pfam; PF04657; DMT_YdcZ; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..149
FT /note="Inner membrane protein YdcZ"
FT /id="PRO_0000168939"
FT TOPO_DOM 1..4
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 5..25
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 26..33
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 34..54
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 55..70
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 71..91
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 92..93
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 94..114
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 115..123
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 124..144
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 145..149
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 149 AA; 15855 MW; 51B015D1E24EC560 CRC64;
MNQSLTLAFL IAAGIGLVVQ NTLMVRITQT SSTILIAMLL NSLVGIVLFV SILWFKQGMA
GFGELVSSVR WWTLIPGLLG SFFVFASISG YQNVGAATTI AVLVASQLIG GLMLDIFRSH
GVPLRALFGP ICGAILLVVG AWLVARRSF
