YDEK_ECOLI
ID YDEK_ECOLI Reviewed; 1325 AA.
AC P32051; P76140; P77168;
DT 01-OCT-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 2.
DT 25-MAY-2022, entry version 147.
DE RecName: Full=Uncharacterized lipoprotein YdeK;
DE AltName: Full=ORFT;
DE Flags: Precursor;
GN Name=ydeK; Synonyms=orfT; OrderedLocusNames=b1510, JW1503;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9097039; DOI=10.1093/dnares/3.6.363;
RA Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., Makino K.,
RA Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S.,
RA Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G.,
RA Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Takeuchi Y.,
RA Wada C., Yamamoto Y., Horiuchi T.;
RT "A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 28.0-40.1 min region on the linkage map.";
RL DNA Res. 3:363-377(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 595-1325.
RX PubMed=8274505; DOI=10.1016/0005-2736(93)90425-y;
RA Cartwright P.J., Timms M.W., Lithgow T., Hoej P.B., Hoogenraad N.J.;
RT "An Escherichia coli gene showing a potential ancestral relationship to the
RT genes for the mitochondrial import site proteins ISP42 and MOM38.";
RL Biochim. Biophys. Acta 1153:345-347(1993).
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000255|PROSITE-
CC ProRule:PRU00303}; Lipid-anchor {ECO:0000255|PROSITE-ProRule:PRU00303}.
CC -!- SIMILARITY: To E.coli YfaL. {ECO:0000305}.
CC -!- CAUTION: Could be the product of a pseudogene. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA51730.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; U00096; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AP009048; BAA15190.2; -; Genomic_DNA.
DR EMBL; X73295; CAA51730.1; ALT_FRAME; Genomic_DNA.
DR PIR; A64905; A64905.
DR AlphaFoldDB; P32051; -.
DR SMR; P32051; -.
DR BioGRID; 4260223; 321.
DR STRING; 316407.85674998; -.
DR PRIDE; P32051; -.
DR EnsemblBacteria; BAA15190; BAA15190; BAA15190.
DR KEGG; ecj:JW1503; -.
DR PATRIC; fig|1411691.4.peg.757; -.
DR EchoBASE; EB1728; -.
DR eggNOG; COG2911; Bacteria.
DR eggNOG; COG3210; Bacteria.
DR HOGENOM; CLU_002551_8_2_6; -.
DR OMA; KWQGGIS; -.
DR PhylomeDB; P32051; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR013425; Autotrns_rpt.
DR InterPro; IPR024973; ESPR.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR InterPro; IPR030895; T5SS_PEPC_rpt.
DR Pfam; PF13018; ESPR; 1.
DR SUPFAM; SSF51126; SSF51126; 1.
DR TIGRFAMs; TIGR02601; autotrns_rpt; 2.
DR TIGRFAMs; TIGR04393; rpt_T5SS_PEPC; 7.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 5: Uncertain;
KW Cell membrane; Lipoprotein; Membrane; Palmitate; Reference proteome;
KW Signal.
FT SIGNAL 1..18
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT CHAIN 19..1325
FT /note="Uncharacterized lipoprotein YdeK"
FT /id="PRO_0000013845"
FT LIPID 19
FT /note="N-palmitoyl cysteine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT LIPID 19
FT /note="S-diacylglycerol cysteine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT CONFLICT 884
FT /note="N -> K (in Ref. 4; CAA51730)"
FT /evidence="ECO:0000305"
FT CONFLICT 1317
FT /note="M -> S (in Ref. 4; CAA51730)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 1325 AA; 136515 MW; 26A3A066FA19AD7D CRC64;
MNRIYRVIWN CTLQVFQACS ELTRRAGKTS TVNLRKSSGL TTKFSRLTLG VLLALSGSAS
GASLEVDNDQ ITNIDTDVAY DAYLVGWYGT GVLNILAGGN ASLTTITTSV IGANEDSEGT
VNVLGGTWRL YDSGNNARPL NVGQSGTGTL NIKQKGHVDG GYLRLGSSTG GVGTVNVEGE
DSVLTTELFE IGSYGTGSLN ITDKGYVTSS IVAILGYQAG SNGQVVVEKG GEWLIKNNDS
SIEFQIGNQG TGEATIREGG LVTAENTIIG GNATGIGTLN VQDQDSVITV RRLYNGYFGN
GTVNISNNGL INNKEYSLVG VQDGSHGVVN VTDKGHWNFL GTGEAFRYIY IGDAGDGELN
VSSEGKVDSG IITAGMKETG TGNITVKDKN SVITNLGTNL GYDGHGEMNI SNQGLVVSNG
GSSLGYGETG VGNVSITTGG MWEVNKNVYT TIGVAGVGNL NISDGGKFVS QNITFLGDKA
SGIGTLNLMD ATSSFDTVGI NVGNFGSGIV NVSNGATLNS TGYGFIGGNA SGKGIVNIST
DSLWNLKTSS TNAQLLQVGV LGTGELNITT GGIVKARDTQ IALNDKSKGD VRVDGQNSLL
ETFNMYVGTS GTGTLTLTNN GTLNVEGGEV YLGVFEPAVG TLNIGAAHGE AAADAGFITN
ATKVEFGLGE GVFVFNHTNN SDAGYQVDML ITGDDKDGKV IHDAGHTVFN AGNTYSGKTL
VNDGLLTIAS HTADGVTGMG SSEVTIANPG TLDILASTNS AGDYTLTNAL KGDGLMRVQL
SSSDKMFGFT HATGTEFAGV AQLKDSTFTL ERDNTAALTH AMLQSDSENT TSVKVGEQSI
GGLAMNGGTI IFDTDIPAAT LAEGYISVDT LVVGAGDYTW KGRNYQVNGT GDVLIDVPKP
WNDPMANNPL TTLNLLEHDD SHVGVQLVKA QTVIGSGGSL TLRDLQGDEV EADKTLHIAQ
NGTVVAEGDY GFRLTTAPGN GLYVNYGLKA LNIHGGQKLT LAEHGGAYGA TADMSAKIGG
EGDLAINTVR QVSLSNGQND YQGATYVQMG TLRTDADGAL GNTRELNISN AAIVDLNGST
QTVETFTGQM GSTVLFKEGA LTVNKGGISQ GELTGGGNLN VTGGTLAIEG LNARYNALTS
ISPNAEVSLD NTQGLGRGNI ANDGLLTLKN VTGELRNSIS GKGIVSATAR TDVELDGDNS
RFVGQFNIDT GSALSVNEQK NLGDASVINN GLLTISTERS WAMTHSISGS GDVTKLGTGI
LTLNNDSAAY QGTTDIVGGE IAFGSDSAIN MASQHINIHN SGVMSGNVTT AGDMNVMPGG
GTACR
