YDET_ECOLI
ID YDET_ECOLI Reviewed; 382 AA.
AC P76137; A0A385XJH7; Q79EJ5;
DT 03-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Fimbrial usher domain-containing protein YdeT;
GN Name=ydeT; OrderedLocusNames=b1505, JW1499;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP DISRUPTION PHENOTYPE.
RC STRAIN=K12 / BW25113;
RX PubMed=25316676; DOI=10.1093/bioinformatics/btu671;
RA Vlasblom J., Zuberi K., Rodriguez H., Arnold R., Gagarinova A., Deineko V.,
RA Kumar A., Leung E., Rizzolo K., Samanfar B., Chang L., Phanse S.,
RA Golshani A., Greenblatt J.F., Houry W.A., Emili A., Morris Q., Bader G.,
RA Babu M.;
RT "Novel function discovery with GeneMANIA: a new integrated resource for
RT gene function prediction in Escherichia coli.";
RL Bioinformatics 31:306-310(2015).
CC -!- DISRUPTION PHENOTYPE: Increased biofilm formation.
CC {ECO:0000269|PubMed:25316676}.
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DR EMBL; U00096; AYC08213.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA15178.2; -; Genomic_DNA.
DR PIR; D64904; D64904.
DR AlphaFoldDB; P76137; -.
DR SMR; P76137; -.
DR BioGRID; 4260204; 258.
DR STRING; 316407.85674995; -.
DR PRIDE; P76137; -.
DR EnsemblBacteria; AYC08213; AYC08213; b1505.
DR EnsemblBacteria; BAA15178; BAA15178; BAA15178.
DR KEGG; ecj:JW1499; -.
DR PATRIC; fig|83333.103.peg.2335; -.
DR eggNOG; COG3188; Bacteria.
DR HOGENOM; CLU_009120_4_0_6; -.
DR InParanoid; P76137; -.
DR PhylomeDB; P76137; -.
DR BioCyc; EcoCyc:G6795-MON; -.
DR PRO; PR:P76137; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IBA:GO_Central.
DR GO; GO:0015473; F:fimbrial usher porin activity; IBA:GO_Central.
DR GO; GO:0009297; P:pilus assembly; IBA:GO_Central.
DR Gene3D; 2.60.40.2070; -; 1.
DR Gene3D; 2.60.40.2610; -; 1.
DR InterPro; IPR000015; Fimb_usher.
DR InterPro; IPR042186; FimD_plug_dom.
DR InterPro; IPR025949; PapC-like_C.
DR InterPro; IPR043142; PapC-like_C_sf.
DR PANTHER; PTHR30451; PTHR30451; 1.
DR Pfam; PF13953; PapC_C; 1.
DR Pfam; PF00577; Usher; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..382
FT /note="Fimbrial usher domain-containing protein YdeT"
FT /id="PRO_0000252228"
SQ SEQUENCE 382 AA; 41616 MW; BFEC3DF021803BB6 CRC64;
MSGYTVKPPT GDTNEQTQFI DYFNLFYSKR GQEQISISQQ LGNYGTTFFS ASRQSYWNTS
RSDQQISFGL NVPFGDITTS LNYSYSNNIW QNDRDHLLAF TLNVPFSHWM RTDSQSAFRN
SNASYSMSND LKGGMTNLSG VYGTLLPDNN LNYSVQVGNT HGGNTSSGTS GYSSLNYRGA
YGNTNVGYSR SGDSSQIYYG MSGGIIAHAD GITFGQPLGD TMVLVKAPGA DNVKIENQTG
IHTDWRGYAI LPFATEYREN RVALNANSLA DNVELDETVV TVIPTHGAIA RATFNAQIGG
KVLMTLKYGN KSVPFGAIVT HGENKNGSIV AENGQVYLTG LPQSGQLQVS WGKDKNSNCI
VEYKLPEVSP GTLLNQQTAI CR