YDFH_ECOL6
ID YDFH_ECOL6 Reviewed; 228 AA.
AC Q8FHD1;
DT 21-NOV-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Uncharacterized HTH-type transcriptional regulator YdfH;
GN Name=ydfH; OrderedLocusNames=c1966;
OS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=199310;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CFT073 / ATCC 700928 / UPEC;
RX PubMed=12471157; DOI=10.1073/pnas.252529799;
RA Welch R.A., Burland V., Plunkett G. III, Redford P., Roesch P., Rasko D.,
RA Buckles E.L., Liou S.-R., Boutin A., Hackett J., Stroud D., Mayhew G.F.,
RA Rose D.J., Zhou S., Schwartz D.C., Perna N.T., Mobley H.L.T.,
RA Donnenberg M.S., Blattner F.R.;
RT "Extensive mosaic structure revealed by the complete genome sequence of
RT uropathogenic Escherichia coli.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:17020-17024(2002).
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DR EMBL; AE014075; AAN80426.1; -; Genomic_DNA.
DR RefSeq; WP_000215535.1; NC_004431.1.
DR AlphaFoldDB; Q8FHD1; -.
DR SMR; Q8FHD1; -.
DR STRING; 199310.c1966; -.
DR EnsemblBacteria; AAN80426; AAN80426; c1966.
DR KEGG; ecc:c1966; -.
DR eggNOG; COG1802; Bacteria.
DR HOGENOM; CLU_017584_5_2_6; -.
DR OMA; AWDTVEN; -.
DR BioCyc; ECOL199310:C1966-MON; -.
DR Proteomes; UP000001410; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 1.10.10.10; -; 1.
DR Gene3D; 1.20.120.530; -; 1.
DR InterPro; IPR011711; GntR_C.
DR InterPro; IPR008920; TF_FadR/GntR_C.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF07729; FCD; 1.
DR Pfam; PF00392; GntR; 1.
DR PRINTS; PR00035; HTHGNTR.
DR SMART; SM00895; FCD; 1.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR SUPFAM; SSF48008; SSF48008; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 4: Predicted;
KW DNA-binding; Transcription; Transcription regulation.
FT CHAIN 1..228
FT /note="Uncharacterized HTH-type transcriptional regulator
FT YdfH"
FT /id="PRO_0000050675"
FT DOMAIN 11..78
FT /note="HTH gntR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00307"
FT DNA_BIND 38..57
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00307"
SQ SEQUENCE 228 AA; 26534 MW; 62E42E18A759BF2F CRC64;
MTVETQLNPT PPVNQQIYRI LRRDIVHCLI APGTPLSEKE VSVRFNVSRQ PVREAFIKLA
ENGLIQIRPQ RGSYVNKISM AQVRNGSFIR QAIECAVARR AASMITESQC YQLEQNLHQQ
RIAIERKQLD DFFELDDNFH QLLTQIADCQ LAWDTIENLK ATVDRVRYMS FDHVSPPEML
LRQHLDIFSA LQKRDGDAVE RAMTQHLQEI SESVRQIRQE NSDWFSEE