YDFO_ECOLI
ID YDFO_ECOLI Reviewed; 136 AA.
AC P76156; Q2MB90;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 15-JUL-1998, sequence version 2.
DT 03-AUG-2022, entry version 128.
DE RecName: Full=Uncharacterized protein YdfO;
GN Name=ydfO; OrderedLocusNames=b1549, JW5252;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP STRUCTURE BY NMR.
RG Northeast structural genomics consortium (NESG);
RT "Solution NMR structure of the ydfO protein from Escherichia coli.
RT northeast structural genomics target ER251.";
RL Submitted (AUG-2006) to the PDB data bank.
CC -!- SIMILARITY: To E.coli YbcV and YcgX. {ECO:0000305}.
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DR EMBL; U00096; AAC74622.2; -; Genomic_DNA.
DR EMBL; AP009048; BAE76466.1; -; Genomic_DNA.
DR PIR; H64909; H64909.
DR RefSeq; NP_416067.2; NC_000913.3.
DR RefSeq; WP_000373090.1; NZ_SSUV01000066.1.
DR PDB; 2HH8; NMR; -; A=1-133.
DR PDBsum; 2HH8; -.
DR AlphaFoldDB; P76156; -.
DR BMRB; P76156; -.
DR SMR; P76156; -.
DR BioGRID; 4260250; 11.
DR STRING; 511145.b1549; -.
DR PaxDb; P76156; -.
DR PRIDE; P76156; -.
DR EnsemblBacteria; AAC74622; AAC74622; b1549.
DR EnsemblBacteria; BAE76466; BAE76466; BAE76466.
DR GeneID; 66674568; -.
DR GeneID; 945992; -.
DR KEGG; ecj:JW5252; -.
DR KEGG; eco:b1549; -.
DR PATRIC; fig|511145.12.peg.1621; -.
DR EchoBASE; EB3588; -.
DR eggNOG; COG5562; Bacteria.
DR HOGENOM; CLU_129752_0_0_6; -.
DR OMA; PIREMEM; -.
DR PhylomeDB; P76156; -.
DR BioCyc; EcoCyc:G6822-MON; -.
DR EvolutionaryTrace; P76156; -.
DR PRO; PR:P76156; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR Gene3D; 3.30.1810.10; -; 1.
DR InterPro; IPR009833; DUF1398.
DR InterPro; IPR036696; YdfO-like_sf.
DR Pfam; PF07166; DUF1398; 1.
DR SUPFAM; SSF160419; SSF160419; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..136
FT /note="Uncharacterized protein YdfO"
FT /id="PRO_0000168958"
FT HELIX 3..17
FT /evidence="ECO:0007829|PDB:2HH8"
FT HELIX 21..30
FT /evidence="ECO:0007829|PDB:2HH8"
FT STRAND 32..38
FT /evidence="ECO:0007829|PDB:2HH8"
FT TURN 39..41
FT /evidence="ECO:0007829|PDB:2HH8"
FT STRAND 42..47
FT /evidence="ECO:0007829|PDB:2HH8"
FT STRAND 49..51
FT /evidence="ECO:0007829|PDB:2HH8"
FT STRAND 53..57
FT /evidence="ECO:0007829|PDB:2HH8"
FT HELIX 71..83
FT /evidence="ECO:0007829|PDB:2HH8"
FT HELIX 88..97
FT /evidence="ECO:0007829|PDB:2HH8"
FT STRAND 102..106
FT /evidence="ECO:0007829|PDB:2HH8"
FT TURN 107..110
FT /evidence="ECO:0007829|PDB:2HH8"
FT STRAND 111..115
FT /evidence="ECO:0007829|PDB:2HH8"
FT STRAND 121..126
FT /evidence="ECO:0007829|PDB:2HH8"
SQ SEQUENCE 136 AA; 16497 MW; 554B812E2DD7B33C CRC64;
MDQVVIFKQI FDKVRNDLNY QWFYSELKRH NVSHYIYYLA TENVHIVLKN DNTVLLKGLK
NIVSVKFSKD RHLIETTSNK LKSREITFQE YRRNLAKAGV FRWVTNIHEQ KRYYYTFDNS
LLFTESIQKT TQILPR