YDG1_ARATH
ID YDG1_ARATH Reviewed; 328 AA.
AC Q9FHI0;
DT 10-AUG-2010, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=YDG domain-containing protein At5g47150;
GN OrderedLocusNames=At5g47150; ORFNames=K14A3.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00358}.
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DR EMBL; AB018117; BAB11611.1; -; Genomic_DNA.
DR EMBL; AB025609; BAB11611.1; JOINED; Genomic_DNA.
DR EMBL; CP002688; AED95476.1; -; Genomic_DNA.
DR RefSeq; NP_199526.1; NM_124086.3.
DR AlphaFoldDB; Q9FHI0; -.
DR SMR; Q9FHI0; -.
DR STRING; 3702.AT5G47150.1; -.
DR PaxDb; Q9FHI0; -.
DR PRIDE; Q9FHI0; -.
DR ProteomicsDB; 243230; -.
DR DNASU; 834761; -.
DR EnsemblPlants; AT5G47150.1; AT5G47150.1; AT5G47150.
DR GeneID; 834761; -.
DR Gramene; AT5G47150.1; AT5G47150.1; AT5G47150.
DR KEGG; ath:AT5G47150; -.
DR Araport; AT5G47150; -.
DR TAIR; locus:2151997; AT5G47150.
DR eggNOG; ENOG502S1J4; Eukaryota.
DR HOGENOM; CLU_055030_0_0_1; -.
DR InParanoid; Q9FHI0; -.
DR OMA; EGTCLKR; -.
DR OrthoDB; 1087144at2759; -.
DR PhylomeDB; Q9FHI0; -.
DR PRO; PR:Q9FHI0; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FHI0; baseline and differential.
DR Genevisible; Q9FHI0; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0042054; F:histone methyltransferase activity; IBA:GO_Central.
DR GO; GO:0016571; P:histone methylation; IBA:GO_Central.
DR Gene3D; 2.30.280.10; -; 1.
DR InterPro; IPR015947; PUA-like_sf.
DR InterPro; IPR036987; SRA-YDG_sf.
DR InterPro; IPR003105; SRA_YDG.
DR Pfam; PF02182; SAD_SRA; 1.
DR SMART; SM00466; SRA; 1.
DR SUPFAM; SSF88697; SSF88697; 1.
DR PROSITE; PS51015; YDG; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome.
FT CHAIN 1..328
FT /note="YDG domain-containing protein At5g47150"
FT /id="PRO_0000396831"
FT DOMAIN 176..320
FT /note="YDG"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00358"
SQ SEQUENCE 328 AA; 36674 MW; C02A78451FCFF8EA CRC64;
MSQKRSLVFA IRDFPPGCGT HIDVSSSLNH PAEKAFKHPR TGDVSGENLS FAEAKPEGTC
LKRESADQDH IFAAPEHNAK REPAGQDHVV AATTVAYATS SHRQKVEIGN SDCDPTPREK
VLEVLSLFKQ VYNQLDRDKK ARRGGDFLDA TSRIDLKTLT VLEKMGKQVN TEKRIGSVPG
INIGDVFQYK TELRVVGLHS KPMCGIDYIK LGDDRITTSI VASEGYGYND TYNSGVMVYT
GEGGNVINKQ KKTEDQKLVK GNLALATSMR QKSQVRVIRG EERLDRKGKR YVYDGLYMVE
EYWVERDVRG KSVYKFKLCR IPGQLPLT
