YDGK_ECOLI
ID YDGK_ECOLI Reviewed; 146 AA.
AC P76180; Q2MB71;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 15-DEC-1998, sequence version 2.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=Inner membrane protein YdgK;
GN Name=ydgK; OrderedLocusNames=b1626, JW1618;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC -!- SIMILARITY: To Synechocystis PCC 6803 sll0481. {ECO:0000305}.
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DR EMBL; U00096; AAC74698.2; -; Genomic_DNA.
DR EMBL; AP009048; BAE76485.1; -; Genomic_DNA.
DR PIR; D64919; D64919.
DR RefSeq; NP_416143.2; NC_000913.3.
DR RefSeq; WP_001310854.1; NZ_SSZK01000001.1.
DR AlphaFoldDB; P76180; -.
DR BioGRID; 4259633; 49.
DR BioGRID; 850514; 1.
DR IntAct; P76180; 1.
DR STRING; 511145.b1626; -.
DR PaxDb; P76180; -.
DR PRIDE; P76180; -.
DR EnsemblBacteria; AAC74698; AAC74698; b1626.
DR EnsemblBacteria; BAE76485; BAE76485; BAE76485.
DR GeneID; 946154; -.
DR KEGG; ecj:JW1618; -.
DR KEGG; eco:b1626; -.
DR PATRIC; fig|1411691.4.peg.635; -.
DR EchoBASE; EB3691; -.
DR eggNOG; ENOG502ZZZI; Bacteria.
DR HOGENOM; CLU_147992_0_0_6; -.
DR OMA; MWCFTLW; -.
DR PhylomeDB; P76180; -.
DR BioCyc; EcoCyc:G6870-MON; -.
DR PRO; PR:P76180; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR InterPro; IPR019690; DUF2569.
DR Pfam; PF10754; DUF2569; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..146
FT /note="Inner membrane protein YdgK"
FT /id="PRO_0000168973"
FT TOPO_DOM 1..12
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 13..33
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 34..59
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 60..80
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 81..89
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 90..110
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 111..112
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 113..133
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 134..146
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 146 AA; 16319 MW; 16EBD8FEBFA5E377 CRC64;
MTTTTPQRIG GWLLGPLAWL LVALLSTTLA LLLYTAALSS PQTFQTLGGQ ALTTQILWGV
SFITAIALWY YTLWLTIAFF KRRRCVPKHY IIWLLISVLL AVKAFAFSPV EDGIAVRQLL
FTLLATALIV PYFKRSSRVK ATFVNP