YDHQ_ECOLI
ID YDHQ_ECOLI Reviewed; 418 AA.
AC P77552;
DT 16-APR-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 135.
DE RecName: Full=Uncharacterized protein YdhQ;
GN Name=ydhQ; OrderedLocusNames=b1664, JW1656;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9023191; DOI=10.1128/jb.179.4.1105-1111.1997;
RA Hensel M., Shea J.E., Baeumler A.J., Gleeson C., Blattner F.R.,
RA Holden D.W.;
RT "Analysis of the boundaries of Salmonella pathogenicity island 2 and the
RT corresponding chromosomal region of Escherichia coli K-12.";
RL J. Bacteriol. 179:1105-1111(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9097039; DOI=10.1093/dnares/3.6.363;
RA Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kasai H., Kashimoto K., Kimura S., Kitakawa M., Kitagawa M., Makino K.,
RA Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S.,
RA Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G.,
RA Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Takeuchi Y.,
RA Wada C., Yamamoto Y., Horiuchi T.;
RT "A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 28.0-40.1 min region on the linkage map.";
RL DNA Res. 3:363-377(1996).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP DISRUPTION PHENOTYPE.
RC STRAIN=K12 / BW25113;
RX PubMed=25316676; DOI=10.1093/bioinformatics/btu671;
RA Vlasblom J., Zuberi K., Rodriguez H., Arnold R., Gagarinova A., Deineko V.,
RA Kumar A., Leung E., Rizzolo K., Samanfar B., Chang L., Phanse S.,
RA Golshani A., Greenblatt J.F., Houry W.A., Emili A., Morris Q., Bader G.,
RA Babu M.;
RT "Novel function discovery with GeneMANIA: a new integrated resource for
RT gene function prediction in Escherichia coli.";
RL Bioinformatics 31:306-310(2015).
CC -!- DISRUPTION PHENOTYPE: Increased biofilm formation.
CC {ECO:0000269|PubMed:25316676}.
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DR EMBL; U68703; AAB47942.1; -; Genomic_DNA.
DR EMBL; U00096; AAC74736.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA15431.1; -; Genomic_DNA.
DR PIR; B64924; B64924.
DR RefSeq; NP_416181.1; NC_000913.3.
DR RefSeq; WP_000534271.1; NZ_SSZK01000001.1.
DR AlphaFoldDB; P77552; -.
DR SMR; P77552; -.
DR DIP; DIP-28088N; -.
DR IntAct; P77552; 16.
DR STRING; 511145.b1664; -.
DR jPOST; P77552; -.
DR PaxDb; P77552; -.
DR PRIDE; P77552; -.
DR EnsemblBacteria; AAC74736; AAC74736; b1664.
DR EnsemblBacteria; BAA15431; BAA15431; BAA15431.
DR GeneID; 944851; -.
DR KEGG; ecj:JW1656; -.
DR KEGG; eco:b1664; -.
DR PATRIC; fig|511145.12.peg.1737; -.
DR EchoBASE; EB3709; -.
DR eggNOG; COG3468; Bacteria.
DR HOGENOM; CLU_656797_0_0_6; -.
DR OMA; ACNCEIN; -.
DR PhylomeDB; P77552; -.
DR BioCyc; EcoCyc:G6894-MON; -.
DR PRO; PR:P77552; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0006974; P:cellular response to DNA damage stimulus; IEP:EcoliWiki.
DR Gene3D; 2.160.20.20; -; 2.
DR InterPro; IPR030930; AIDA.
DR InterPro; IPR012332; Autotransporter_pectin_lyase_C.
DR InterPro; IPR011050; Pectin_lyase_fold/virulence.
DR InterPro; IPR004899; Pertactin_central.
DR Pfam; PF16168; AIDA; 1.
DR Pfam; PF03212; Pertactin; 1.
DR SUPFAM; SSF51126; SSF51126; 1.
DR TIGRFAMs; TIGR04415; O_hepto_targRPT; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..418
FT /note="Uncharacterized protein YdhQ"
FT /id="PRO_0000201324"
SQ SEQUENCE 418 AA; 42876 MW; 56360B78C2E6FDBF CRC64;
MGSDAKNLMS DGNVQIVKTG EVIGATQLTE GELIVEAGGR AENTVVTGAG WLKVATGGIA
KCTQYGNNGT LSVSDGAIAT DIVQSEGGAI SLSTLATVNG RHPEGEFSVD KGYACGLLLE
NGGNLRVLEG HRAEKIILDQ EGGLLVNGTT SAVVVDEGGE LLVYPGGEAS NCEINQGGVF
MLAGKASDTL LAGGTMNNLG GEDSDTIVEN GSIYRLGTDG LQLYSSGKTQ NLSVNVGGRA
EVHAGTLENA VIQGGTVILL SPTSADENFV VEEDRAPVEL TGSVALLDGA SMIIGYGAEL
QQSTITVQQG GVLILDGSTV KGDSVTFIVG NINLNGGKLW LITDAATHVQ LKVKRLRGEG
AICLQTSAKE ISPDFINVKG EVTGDIHVEI TDASRQTLCN ALKLQPDEDG IGATLQPA