ID   YDIF_BACSU              Reviewed;         642 AA.
AC   O05519;
DT   15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT   07-JUL-2009, sequence version 2.
DT   03-AUG-2022, entry version 128.
DE   RecName: Full=Putative ATP-binding protein YdiF;
GN   Name=ydiF; OrderedLocusNames=BSU05950;
OS   Bacillus subtilis (strain 168).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=224308;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168 / JH642;
RX   PubMed=9202461; DOI=10.1099/00221287-143-6-1861;
RA   Sadaie Y., Yata K., Fujita M., Sagai H., Itaya M., Kasahara Y.,
RA   Ogasawara N.;
RT   "Nucleotide sequence and analysis of the phoB-rrnE-groESL region of the
RT   Bacillus subtilis chromosome.";
RL   Microbiology 143:1861-1866(1997).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=9384377; DOI=10.1038/36786;
RA   Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA   Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA   Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA   Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA   Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA   Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA   Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA   Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA   Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA   Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA   Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA   Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA   Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA   Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA   Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA   Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA   Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA   Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA   Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA   Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA   Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA   Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA   Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA   Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA   Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA   Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA   Yoshikawa H., Danchin A.;
RT   "The complete genome sequence of the Gram-positive bacterium Bacillus
RT   subtilis.";
RL   Nature 390:249-256(1997).
RN   [3]
RP   SEQUENCE REVISION TO 6.
RX   PubMed=19383706; DOI=10.1099/mic.0.027839-0;
RA   Barbe V., Cruveiller S., Kunst F., Lenoble P., Meurice G., Sekowska A.,
RA   Vallenet D., Wang T., Moszer I., Medigue C., Danchin A.;
RT   "From a consortium sequence to a unified sequence: the Bacillus subtilis
RT   168 reference genome a decade later.";
RL   Microbiology 155:1758-1775(2009).
RN   [4]
RP   FAMILY.
RX   PubMed=30597160; DOI=10.1016/j.jmb.2018.12.013;
RA   Murina V., Kasari M., Takada H., Hinnu M., Saha C.K., Grimshaw J.W.,
RA   Seki T., Reith M., Putrins M., Tenson T., Strahl H., Hauryliuk V.,
RA   Atkinson G.C.;
RT   "ABCF ATPases involved in protein synthesis, ribosome assembly and
RT   antibiotic resistance: structural and functional diversification across the
RT   tree of life.";
RL   J. Mol. Biol. 431:3568-3590(2019).
CC   -!- SIMILARITY: Belongs to the ABC transporter superfamily. ABCF family.
CC       YdiF subfamily. {ECO:0000303|PubMed:30597160}.
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DR   EMBL; D88802; BAA19719.1; -; Genomic_DNA.
DR   EMBL; AL009126; CAB12414.2; -; Genomic_DNA.
DR   PIR; G69786; G69786.
DR   RefSeq; NP_388476.2; NC_000964.3.
DR   RefSeq; WP_003244150.1; NZ_JNCM01000032.1.
DR   AlphaFoldDB; O05519; -.
DR   SMR; O05519; -.
DR   STRING; 224308.BSU05950; -.
DR   jPOST; O05519; -.
DR   PaxDb; O05519; -.
DR   PRIDE; O05519; -.
DR   EnsemblBacteria; CAB12414; CAB12414; BSU_05950.
DR   GeneID; 938013; -.
DR   KEGG; bsu:BSU05950; -.
DR   PATRIC; fig|224308.179.peg.640; -.
DR   eggNOG; COG0488; Bacteria.
DR   InParanoid; O05519; -.
DR   OMA; AQADKMR; -.
DR   PhylomeDB; O05519; -.
DR   BioCyc; BSUB:BSU05950-MON; -.
DR   Proteomes; UP000001570; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IBA:GO_Central.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   Gene3D; 1.10.287.380; -; 1.
DR   Gene3D; 3.40.50.300; -; 2.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR032524; ABC_tran_C.
DR   InterPro; IPR032781; ABC_tran_Xtn.
DR   InterPro; IPR003439; ABC_transporter-like_ATP-bd.
DR   InterPro; IPR017871; ABC_transporter-like_CS.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR037118; Val-tRNA_synth_C_sf.
DR   Pfam; PF00005; ABC_tran; 2.
DR   Pfam; PF16326; ABC_tran_CTD; 1.
DR   Pfam; PF12848; ABC_tran_Xtn; 1.
DR   SMART; SM00382; AAA; 2.
DR   SUPFAM; SSF52540; SSF52540; 2.
DR   PROSITE; PS00211; ABC_TRANSPORTER_1; 2.
DR   PROSITE; PS50893; ABC_TRANSPORTER_2; 2.
PE   3: Inferred from homology;
KW   ATP-binding; Nucleotide-binding; Reference proteome; Repeat.
FT   CHAIN           1..642
FT                   /note="Putative ATP-binding protein YdiF"
FT                   /id="PRO_0000093139"
FT   DOMAIN          4..259
FT                   /note="ABC transporter 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00434"
FT   DOMAIN          327..541
FT                   /note="ABC transporter 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00434"
FT   REGION          541..567
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         36..43
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00434"
FT   BINDING         360..367
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00434"
FT   CONFLICT        6
FT                   /note="V -> A (in Ref. 1; BAA19719)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   642 AA;  73482 MW;  7F5101DC53798A94 CRC64;
     MMILQVNQLS KSFGADTILN NIKLEVRNRD RIAIVGRNGA GKSTLLKIIA GQLSYEKGEI
     IKPKDITMGY LAQHTGLDSK LTIKEELLTV FDHLKAMEKE MRAMEEKMAA ADPGELESIM
     KTYDRLQQEF KDKGGYQYEA DVRSVLHGLG FSHFDDSTQV QSLSGGQKTR LALGKLLLTQ
     PDLLILDEPT NHLDIDTLTW LEHYLQGYSG AILIVSHDRY FLDKVVNQVY EVSRAESKKY
     HGNYSAYLDQ KAAQYEKDLK MYEKQQDEIA KLQDFVDRNL ARASTTKRAQ SRRKQLERMD
     VMSKPLGDEK SANFHFDITK QSGNEVLRVQ DLTISYENQP PLLTEVSFML TRGESAALVG
     PNGIGKSTLL KTLIDTLKPD QGTISYGSNV SVGYYDQEQA ELTSSKRVLD ELWDEYPGLP
     EKEIRTCLGN FLFSGDDVLK PVHSLSGGEK ARLALAKLML QKANFLILDE PTNHLDLDSK
     EVLENALIDY PGTLLFVSHD RYFINRIATR VLELSSSHIE EYLGDYDYYT EKKTEQLELE
     KMNQQEETDK TPATVKSDSK RSYEEEKEWK KKERQRLRRI EEIETTVQTI EENISRNDEL
     LCDPEVYQDH EKVQAIHADN EKLNQELESL LSEWEELSTE ED