YDJC_VIBVU
ID YDJC_VIBVU Reviewed; 252 AA.
AC Q8DCD5;
DT 20-JUN-2003, integrated into UniProtKB/Swiss-Prot.
DT 20-JUN-2003, sequence version 2.
DT 03-AUG-2022, entry version 89.
DE RecName: Full=Carbohydrate deacetylase {ECO:0000255|HAMAP-Rule:MF_01246};
DE EC=3.5.1.- {ECO:0000255|HAMAP-Rule:MF_01246};
GN OrderedLocusNames=VV1_1486;
OS Vibrio vulnificus (strain CMCP6).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=216895;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CMCP6;
RA Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.;
RT "Complete genome sequence of Vibrio vulnificus CMCP6.";
RL Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Probably catalyzes the deacetylation of acetylated
CC carbohydrates an important step in the degradation of oligosaccharides.
CC {ECO:0000255|HAMAP-Rule:MF_01246}.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01246};
CC -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_01246}.
CC -!- SIMILARITY: Belongs to the YdjC deacetylase family. {ECO:0000255|HAMAP-
CC Rule:MF_01246}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAO09925.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AE016795; AAO09925.1; ALT_INIT; Genomic_DNA.
DR RefSeq; WP_026130615.1; NC_004459.3.
DR AlphaFoldDB; Q8DCD5; -.
DR SMR; Q8DCD5; -.
DR EnsemblBacteria; AAO09925; AAO09925; VV1_1486.
DR KEGG; vvu:VV1_1486; -.
DR HOGENOM; CLU_064244_4_0_6; -.
DR OMA; EPTHIDS; -.
DR Proteomes; UP000002275; Chromosome 1.
DR GO; GO:0016811; F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; IEA:UniProtKB-UniRule.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000272; P:polysaccharide catabolic process; IEA:InterPro.
DR CDD; cd10803; YdjC_EF3048_like; 1.
DR HAMAP; MF_01246; COD; 1.
DR InterPro; IPR022948; COD_ChbG_bac.
DR InterPro; IPR011330; Glyco_hydro/deAcase_b/a-brl.
DR InterPro; IPR006879; YdjC-like.
DR PANTHER; PTHR31609; PTHR31609; 2.
DR Pfam; PF04794; YdjC; 1.
DR SUPFAM; SSF88713; SSF88713; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism; Hydrolase; Magnesium; Metal-binding.
FT CHAIN 1..252
FT /note="Carbohydrate deacetylase"
FT /id="PRO_0000051605"
FT BINDING 59
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01246"
FT BINDING 122
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01246"
SQ SEQUENCE 252 AA; 28538 MW; F30EA96C3B00109C CRC64;
MKVIFNADDF GLTRGVNDGI VHAHLDGVVR STTMMVGMPA EAHAVELANH LPELKVGLHL
RFTAGRPLTE EQNLVGRDGD FTPYGQFWHR RDYDPIAIHN EAVAQVEYFL ALGLNLSHID
SHHHAHTHPQ FEPVIYDIAR TYQVPLRSTG LAGEEEFGCR YHFTDHFYDK RVGHDSLIQH
LLTLKEHYDV VEVMCHPAIV DTALEACSGY AKQRELELAI LTSDELKLSL RKHDIEVTDY
SELIFAPLHS CV