YDJC_VIBVY
ID YDJC_VIBVY Reviewed; 252 AA.
AC Q7MHH4;
DT 15-DEC-2003, integrated into UniProtKB/Swiss-Prot.
DT 15-DEC-2003, sequence version 1.
DT 03-AUG-2022, entry version 95.
DE RecName: Full=Carbohydrate deacetylase {ECO:0000255|HAMAP-Rule:MF_01246};
DE EC=3.5.1.- {ECO:0000255|HAMAP-Rule:MF_01246};
GN OrderedLocusNames=VV2897;
OS Vibrio vulnificus (strain YJ016).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=196600;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YJ016;
RX PubMed=14656965; DOI=10.1101/gr.1295503;
RA Chen C.-Y., Wu K.-M., Chang Y.-C., Chang C.-H., Tsai H.-C., Liao T.-L.,
RA Liu Y.-M., Chen H.-J., Shen A.B.-T., Li J.-C., Su T.-L., Shao C.-P.,
RA Lee C.-T., Hor L.-I., Tsai S.-F.;
RT "Comparative genome analysis of Vibrio vulnificus, a marine pathogen.";
RL Genome Res. 13:2577-2587(2003).
CC -!- FUNCTION: Probably catalyzes the deacetylation of acetylated
CC carbohydrates an important step in the degradation of oligosaccharides.
CC {ECO:0000255|HAMAP-Rule:MF_01246}.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_01246};
CC -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_01246}.
CC -!- SIMILARITY: Belongs to the YdjC deacetylase family. {ECO:0000255|HAMAP-
CC Rule:MF_01246}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAC95661.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR EMBL; BA000037; BAC95661.1; ALT_INIT; Genomic_DNA.
DR RefSeq; WP_043877327.1; NC_005139.1.
DR AlphaFoldDB; Q7MHH4; -.
DR SMR; Q7MHH4; -.
DR STRING; 672.VV93_v1c26030; -.
DR EnsemblBacteria; BAC95661; BAC95661; BAC95661.
DR KEGG; vvy:VV2897; -.
DR PATRIC; fig|196600.6.peg.2880; -.
DR eggNOG; COG3394; Bacteria.
DR HOGENOM; CLU_064244_4_0_6; -.
DR OMA; EPTHIDS; -.
DR Proteomes; UP000002675; Chromosome I.
DR GO; GO:0016811; F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; IEA:UniProtKB-UniRule.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000272; P:polysaccharide catabolic process; IEA:InterPro.
DR CDD; cd10803; YdjC_EF3048_like; 1.
DR HAMAP; MF_01246; COD; 1.
DR InterPro; IPR022948; COD_ChbG_bac.
DR InterPro; IPR011330; Glyco_hydro/deAcase_b/a-brl.
DR InterPro; IPR006879; YdjC-like.
DR PANTHER; PTHR31609; PTHR31609; 2.
DR Pfam; PF04794; YdjC; 1.
DR SUPFAM; SSF88713; SSF88713; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism; Hydrolase; Magnesium; Metal-binding;
KW Reference proteome.
FT CHAIN 1..252
FT /note="Carbohydrate deacetylase"
FT /id="PRO_0000051606"
FT BINDING 59
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01246"
FT BINDING 122
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01246"
SQ SEQUENCE 252 AA; 28480 MW; DA6FCB6C28D74657 CRC64;
MKVIFNADDF GLTRGVNDGI VHAHLDGVVR STTMMVGMPA EAHAVELANH LPELKVGLHL
RFTAGRPLTE GQNLVGRDGD FTPYGQFWHR RDYDPIAIHN EAVAQVEYFL ALGLNLSHID
SHHHAHTHPQ FEPVIYDIAR TYQVPLRSTG LAGEEEFGCR YHFTDHFYDK RVGHDSLIQH
LLTLKEHYDV VEVMCHPAIL DTALEACSGY AKQRELELAI LTSDELKLSL RKHDIEVTDY
SELIFAPLHS CV