YDJM_SHIFL
ID YDJM_SHIFL Reviewed; 196 AA.
AC P64482; P76209;
DT 11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT 24-NOV-2009, sequence version 2.
DT 25-MAY-2022, entry version 95.
DE RecName: Full=Inner membrane protein YdjM;
GN Name=ydjM; OrderedLocusNames=SF1502, S1619;
OS Shigella flexneri.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Shigella.
OX NCBI_TaxID=623;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=301 / Serotype 2a;
RX PubMed=12384590; DOI=10.1093/nar/gkf566;
RA Jin Q., Yuan Z., Xu J., Wang Y., Shen Y., Lu W., Wang J., Liu H., Yang J.,
RA Yang F., Zhang X., Zhang J., Yang G., Wu H., Qu D., Dong J., Sun L.,
RA Xue Y., Zhao A., Gao Y., Zhu J., Kan B., Ding K., Chen S., Cheng H.,
RA Yao Z., He B., Chen R., Ma D., Qiang B., Wen Y., Hou Y., Yu J.;
RT "Genome sequence of Shigella flexneri 2a: insights into pathogenicity
RT through comparison with genomes of Escherichia coli K12 and O157.";
RL Nucleic Acids Res. 30:4432-4441(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700930 / 2457T / Serotype 2a;
RX PubMed=12704152; DOI=10.1128/iai.71.5.2775-2786.2003;
RA Wei J., Goldberg M.B., Burland V., Venkatesan M.M., Deng W., Fournier G.,
RA Mayhew G.F., Plunkett G. III, Rose D.J., Darling A., Mau B., Perna N.T.,
RA Payne S.M., Runyen-Janecky L.J., Zhou S., Schwartz D.C., Blattner F.R.;
RT "Complete genome sequence and comparative genomics of Shigella flexneri
RT serotype 2a strain 2457T.";
RL Infect. Immun. 71:2775-2786(2003).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- SIMILARITY: To B.subtilis YvsG. {ECO:0000305}.
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DR EMBL; AE005674; AAN43093.2; -; Genomic_DNA.
DR EMBL; AE014073; AAP16983.1; -; Genomic_DNA.
DR RefSeq; NP_707386.2; NC_004337.2.
DR RefSeq; WP_001297653.1; NZ_WPGW01000155.1.
DR AlphaFoldDB; P64482; -.
DR STRING; 198214.SF1502; -.
DR EnsemblBacteria; AAN43093; AAN43093; SF1502.
DR EnsemblBacteria; AAP16983; AAP16983; S1619.
DR GeneID; 1024675; -.
DR GeneID; 66674378; -.
DR KEGG; sfl:SF1502; -.
DR KEGG; sfx:S1619; -.
DR PATRIC; fig|198214.7.peg.1774; -.
DR HOGENOM; CLU_097802_2_1_6; -.
DR OrthoDB; 1667936at2; -.
DR Proteomes; UP000001006; Chromosome.
DR Proteomes; UP000002673; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR016956; YdjM.
DR InterPro; IPR007404; YdjM-like.
DR Pfam; PF04307; YdjM; 1.
DR PIRSF; PIRSF030780; Md_memb_hyd_prd; 1.
PE 3: Inferred from homology;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..196
FT /note="Inner membrane protein YdjM"
FT /id="PRO_0000013858"
FT TOPO_DOM 1..23
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 24..44
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 45..77
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 78..98
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 99..106
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 107..127
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 128..149
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 150..170
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 171..196
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 196 AA; 22350 MW; 9CB6F59FAD010235 CRC64;
MTAEGHLLFS IACAVFAKNA ELTPVLAQGD WWHIVPSAIL TCLLPDIDHP KSFLGQRLKW
ISKPIARAFG HRGFTHSLLA VFALLATFYL KVPEGWFIPA DALQGMVLGY LSHILADMLT
PAGVPLLWPC RWRFRLPILV PQKGNQLERF ICMALFVWSV WMPHSLPENS AVRWSSQMIN
TLQIQFHRLI KHQVEY