YDMD_SCHPO
ID YDMD_SCHPO Reviewed; 565 AA.
AC P87143;
DT 11-SEP-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-1997, sequence version 1.
DT 25-MAY-2022, entry version 121.
DE RecName: Full=Uncharacterized RNA-binding protein C57A7.13;
GN ORFNames=SPAC57A7.13;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX PubMed=16823372; DOI=10.1038/nbt1222;
RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
RA Yoshida M.;
RT "ORFeome cloning and global analysis of protein localization in the fission
RT yeast Schizosaccharomyces pombe.";
RL Nat. Biotechnol. 24:841-847(2006).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16823372}.
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DR EMBL; CU329670; CAB08771.1; -; Genomic_DNA.
DR PIR; T38941; T38941.
DR RefSeq; NP_593368.1; NM_001018800.2.
DR AlphaFoldDB; P87143; -.
DR BioGRID; 278984; 10.
DR STRING; 4896.SPAC57A7.13.1; -.
DR PaxDb; P87143; -.
DR PRIDE; P87143; -.
DR EnsemblFungi; SPAC57A7.13.1; SPAC57A7.13.1:pep; SPAC57A7.13.
DR GeneID; 2542526; -.
DR KEGG; spo:SPAC57A7.13; -.
DR PomBase; SPAC57A7.13; -.
DR VEuPathDB; FungiDB:SPAC57A7.13; -.
DR eggNOG; KOG0154; Eukaryota.
DR HOGENOM; CLU_037991_0_0_1; -.
DR InParanoid; P87143; -.
DR OMA; MTPVDRV; -.
DR PhylomeDB; P87143; -.
DR PRO; PR:P87143; -.
DR Proteomes; UP000002485; Chromosome I.
DR GO; GO:0005634; C:nucleus; IDA:PomBase.
DR GO; GO:0003723; F:RNA binding; ISM:PomBase.
DR GO; GO:0008270; F:zinc ion binding; ISM:PomBase.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; NAS:PomBase.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR GO; GO:0031445; P:regulation of heterochromatin assembly; IMP:PomBase.
DR GO; GO:0048024; P:regulation of mRNA splicing, via spliceosome; IMP:PomBase.
DR Gene3D; 3.30.70.330; -; 2.
DR InterPro; IPR000467; G_patch_dom.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR001876; Znf_RanBP2.
DR Pfam; PF01585; G-patch; 1.
DR SMART; SM00443; G_patch; 1.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; SSF54928; 1.
DR PROSITE; PS50174; G_PATCH; 1.
DR PROSITE; PS50102; RRM; 2.
DR PROSITE; PS01358; ZF_RANBP2_1; 1.
DR PROSITE; PS50199; ZF_RANBP2_2; 1.
PE 4: Predicted;
KW Metal-binding; Nucleus; Reference proteome; Repeat; RNA-binding; Zinc;
KW Zinc-finger.
FT CHAIN 1..565
FT /note="Uncharacterized RNA-binding protein C57A7.13"
FT /id="PRO_0000303889"
FT DOMAIN 71..151
FT /note="RRM 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 209..293
FT /note="RRM 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00176"
FT DOMAIN 490..536
FT /note="G-patch"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00092"
FT ZN_FING 153..184
FT /note="RanBP2-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00322"
FT ZN_FING 404..429
FT /note="C2H2-type"
SQ SEQUENCE 565 AA; 64416 MW; 3D11854C7058C654 CRC64;
MKDYYSENGF EEIFEEKGST SSNISDNCAS RDYDVNISSD NPRLLDSYRP KGNYGRDRNS
PLSRHIGVPN QEIILQGLTP EILEEHIELA LYATGAKVST VTLIREKETQ KSRCFAFAKF
VSLQDSKDWM EANFPTLVID GIDVSVRFSR AAREQIEGWC CQNCDILNYS YRESCFKCRV
PRNQASIAIG NHKISKRNGD MDVSDVPSVY LILRNLDRSL SEETLWKGLS KLEIDVQRVF
MIRYKFNDAF CGYAILEFKD VDESAKALMK ARTYPGKGFT LASRKVSVDY IHDGVLIPAY
TESARWQFPT KTGYLVYWDP ELYCSIYVPE GIDTDQFKPI EVNKKPKKEK RARSSNYIDV
PASKKVATSL QRWNDAQKEL KDNIPDLSEE EEKLLLHFVW KSALICVLCE RKFQSWGHVV
KHITQSIMHN NNLKNHELVS SAELLMHRVR QTESVDYRDR ATERRIVPAA SSDTIVEAKK
SSQGSSFHST SNVSMKMLNS MGWNKGSGLG TNENGIKEAI QPTMYLPGVG LGNKGSKIQI
NMTPVDRVKD RARSLYFQND KNNNL
