YEDF_ECOLI
ID YEDF_ECOLI Reviewed; 77 AA.
AC P0AA31; P31065;
DT 13-SEP-2005, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2005, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Putative sulfur carrier protein YedF;
GN Name=yedF; OrderedLocusNames=b1930, JW1915;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8371104; DOI=10.1099/00221287-139-7-1401;
RA Raha M., Kihara M., Kawagishi I., Macnab R.M.;
RT "Organization of the Escherichia coli and Salmonella typhimurium
RT chromosomes between flagellar regions IIIa and IIIb, including a large non-
RT coding region.";
RL J. Gen. Microbiol. 139:1401-1407(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9097040; DOI=10.1093/dnares/3.6.379;
RA Itoh T., Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K.,
RA Kasai H., Kimura S., Kitakawa M., Kitagawa M., Makino K., Miki T.,
RA Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S., Nakamura Y.,
RA Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G., Seki Y.,
RA Sivasundaram S., Tagami H., Takeda J., Takemoto K., Wada C., Yamamoto Y.,
RA Horiuchi T.;
RT "A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 40.1-50.0 min region on the linkage map.";
RL DNA Res. 3:379-392(1996).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP STRUCTURE BY NMR.
RX PubMed=11854485; DOI=10.1073/pnas.042684599;
RA Yee A., Chang X., Pineda-Lucena A., Wu B., Semesi A., Le B., Ramelot T.,
RA Lee G.M., Bhattacharyya S., Gutierrez P., Denisov A., Lee C.-H., Cort J.R.,
RA Kozlov G., Liao J., Finak G., Chen L., Wishart D., Lee W., McIntosh L.P.,
RA Gehring K., Kennedy M.A., Edwards A.M., Arrowsmith C.H.;
RT "An NMR approach to structural proteomics.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:1825-1830(2002).
CC -!- SIMILARITY: Belongs to the sulfur carrier protein TusA family.
CC {ECO:0000305}.
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DR EMBL; L13279; AAA82578.1; -; Genomic_DNA.
DR EMBL; U00096; AAC74997.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA15758.1; -; Genomic_DNA.
DR PIR; G64956; G64956.
DR RefSeq; NP_416440.1; NC_000913.3.
DR RefSeq; WP_000790504.1; NZ_STEB01000026.1.
DR PDB; 1JE3; NMR; -; A=1-77.
DR PDBsum; 1JE3; -.
DR AlphaFoldDB; P0AA31; -.
DR BMRB; P0AA31; -.
DR SMR; P0AA31; -.
DR BioGRID; 4261059; 7.
DR IntAct; P0AA31; 4.
DR STRING; 511145.b1930; -.
DR jPOST; P0AA31; -.
DR PaxDb; P0AA31; -.
DR PRIDE; P0AA31; -.
DR EnsemblBacteria; AAC74997; AAC74997; b1930.
DR EnsemblBacteria; BAA15758; BAA15758; BAA15758.
DR GeneID; 64169660; -.
DR GeneID; 67513677; -.
DR GeneID; 946909; -.
DR KEGG; ecj:JW1915; -.
DR KEGG; eco:b1930; -.
DR PATRIC; fig|511145.12.peg.2012; -.
DR EchoBASE; EB1613; -.
DR eggNOG; COG0425; Bacteria.
DR HOGENOM; CLU_165255_0_0_6; -.
DR InParanoid; P0AA31; -.
DR OMA; VCPYPQL; -.
DR PhylomeDB; P0AA31; -.
DR BioCyc; EcoCyc:EG11661-MON; -.
DR EvolutionaryTrace; P0AA31; -.
DR PRO; PR:P0AA31; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0006974; P:cellular response to DNA damage stimulus; IEP:EcoliWiki.
DR Gene3D; 3.30.110.40; -; 1.
DR InterPro; IPR001455; TusA-like.
DR InterPro; IPR036868; TusA-like_sf.
DR Pfam; PF01206; TusA; 1.
DR SUPFAM; SSF64307; SSF64307; 1.
DR PROSITE; PS01148; UPF0033; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..77
FT /note="Putative sulfur carrier protein YedF"
FT /id="PRO_0000159062"
FT ACT_SITE 17
FT /note="Cysteine persulfide intermediate"
FT /evidence="ECO:0000250|UniProtKB:P0A890"
FT STRAND 6..10
FT /evidence="ECO:0007829|PDB:1JE3"
FT STRAND 16..20
FT /evidence="ECO:0007829|PDB:1JE3"
FT HELIX 22..27
FT /evidence="ECO:0007829|PDB:1JE3"
FT TURN 28..30
FT /evidence="ECO:0007829|PDB:1JE3"
FT STRAND 36..42
FT /evidence="ECO:0007829|PDB:1JE3"
FT STRAND 44..47
FT /evidence="ECO:0007829|PDB:1JE3"
FT HELIX 49..57
FT /evidence="ECO:0007829|PDB:1JE3"
FT STRAND 60..66
FT /evidence="ECO:0007829|PDB:1JE3"
FT STRAND 68..76
FT /evidence="ECO:0007829|PDB:1JE3"
SQ SEQUENCE 77 AA; 8639 MW; 40E393E76CC54AB0 CRC64;
MKNIVPDYRL DMVGEPCPYP AVATLEAMPQ LKKGEILEVV SDCPQSINNI PLDARNHGYT
VLDIQQDGPT IRYLIQK
