YEDJ_ECOLI
ID YEDJ_ECOLI Reviewed; 231 AA.
AC P46144; P76333;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 2.
DT 03-AUG-2022, entry version 133.
DE RecName: Full=Uncharacterized protein YedJ;
GN Name=yedJ; OrderedLocusNames=b1962, JW1945;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9097040; DOI=10.1093/dnares/3.6.379;
RA Itoh T., Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K.,
RA Kasai H., Kimura S., Kitakawa M., Kitagawa M., Makino K., Miki T.,
RA Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S., Nakamura Y.,
RA Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G., Seki Y.,
RA Sivasundaram S., Tagami H., Takeda J., Takemoto K., Wada C., Yamamoto Y.,
RA Horiuchi T.;
RT "A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 40.1-50.0 min region on the linkage map.";
RL DNA Res. 3:379-392(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 156-231.
RC STRAIN=K12;
RX PubMed=2527357; DOI=10.1093/nar/17.14.5844;
RA Hanck T., Gerwin N., Fritz H.-J.;
RT "Nucleotide sequence of the dcm locus of Escherichia coli K12.";
RL Nucleic Acids Res. 17:5844-5844(1989).
RN [5]
RP IDENTIFICATION.
RX PubMed=7567469; DOI=10.1093/nar/23.17.3554;
RA Borodovsky M., McIninch J., Koonin E.V., Rudd K.E., Medigue C., Danchin A.;
RT "Detection of new genes in a bacterial genome using Markov models for three
RT gene classes.";
RL Nucleic Acids Res. 23:3554-3562(1995).
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DR EMBL; U00096; AAC75028.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA15790.1; -; Genomic_DNA.
DR EMBL; X13330; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PIR; F64960; F64960.
DR RefSeq; NP_416471.1; NC_000913.3.
DR RefSeq; WP_000365562.1; NZ_SSTT01000011.1.
DR PDB; 3GW7; X-ray; 3.30 A; A/B=1-231.
DR PDBsum; 3GW7; -.
DR AlphaFoldDB; P46144; -.
DR SMR; P46144; -.
DR BioGRID; 4259162; 13.
DR BioGRID; 850829; 3.
DR IntAct; P46144; 13.
DR STRING; 511145.b1962; -.
DR PaxDb; P46144; -.
DR PRIDE; P46144; -.
DR EnsemblBacteria; AAC75028; AAC75028; b1962.
DR EnsemblBacteria; BAA15790; BAA15790; BAA15790.
DR GeneID; 58461771; -.
DR GeneID; 946478; -.
DR KEGG; ecj:JW1945; -.
DR KEGG; eco:b1962; -.
DR PATRIC; fig|1411691.4.peg.290; -.
DR EchoBASE; EB2572; -.
DR eggNOG; COG1418; Bacteria.
DR HOGENOM; CLU_036524_3_0_6; -.
DR InParanoid; P46144; -.
DR OMA; GHDWFHI; -.
DR PhylomeDB; P46144; -.
DR BioCyc; EcoCyc:EG12710-MON; -.
DR EvolutionaryTrace; P46144; -.
DR PRO; PR:P46144; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR CDD; cd00077; HDc; 1.
DR InterPro; IPR003607; HD/PDEase_dom.
DR InterPro; IPR006674; HD_domain.
DR Pfam; PF01966; HD; 1.
DR SMART; SM00471; HDc; 1.
DR PROSITE; PS51831; HD; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..231
FT /note="Uncharacterized protein YedJ"
FT /id="PRO_0000169093"
FT DOMAIN 26..132
FT /note="HD"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01175"
FT TURN 5..7
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 8..10
FT /evidence="ECO:0007829|PDB:3GW7"
FT TURN 11..15
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 29..40
FT /evidence="ECO:0007829|PDB:3GW7"
FT TURN 41..43
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 50..57
FT /evidence="ECO:0007829|PDB:3GW7"
FT TURN 58..61
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 75..85
FT /evidence="ECO:0007829|PDB:3GW7"
FT TURN 86..90
FT /evidence="ECO:0007829|PDB:3GW7"
FT TURN 94..97
FT /evidence="ECO:0007829|PDB:3GW7"
FT TURN 100..102
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 103..105
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 118..126
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 128..131
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 133..146
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 153..159
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 170..174
FT /evidence="ECO:0007829|PDB:3GW7"
FT TURN 175..177
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 178..180
FT /evidence="ECO:0007829|PDB:3GW7"
FT TURN 181..184
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 188..212
FT /evidence="ECO:0007829|PDB:3GW7"
FT HELIX 224..227
FT /evidence="ECO:0007829|PDB:3GW7"
SQ SEQUENCE 231 AA; 25904 MW; 231A38356D16D89A CRC64;
MDLQHWQAQF ENWLKNHHQH QDAAHDVCHF RRVWATAQKL AADDDVDMLV ILTACYFHDI
VSLAKNHPQR QRSSILAAEE TRRLLREEFE QFPAEKIEAV CHAIAAHSFS AQIAPLTTEA
KIVQDADRLE ALGAIGLARV FAVSGALGVA LFDGEDPFAQ HRPLDDKRYA LDHFQTKLLK
LPQTMQTARG KQLAQHNAHF LVEFMAKLSA ELAGENEGVD HKVIDAFSSA G
