YESO_BACSU
ID YESO_BACSU Reviewed; 427 AA.
AC O31518;
DT 03-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 2.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=Putative ABC transporter substrate-binding protein YesO;
GN Name=yesO; OrderedLocusNames=BSU06970;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
RN [2]
RP FUNCTION IN DEGRADATION OF TYPE I RHAMNOGALACTURONAN, AND INDUCTION.
RX PubMed=17449691; DOI=10.1128/aem.00147-07;
RA Ochiai A., Itoh T., Kawamata A., Hashimoto W., Murata K.;
RT "Plant cell wall degradation by saprophytic Bacillus subtilis strains: gene
RT clusters responsible for rhamnogalacturonan depolymerization.";
RL Appl. Environ. Microbiol. 73:3803-3813(2007).
CC -!- FUNCTION: May play a role in the degradation of type I
CC rhamnogalacturonan derived from plant cell walls.
CC {ECO:0000269|PubMed:17449691}.
CC -!- INDUCTION: Up-regulated by growth on type I rhamnogalacturonan.
CC {ECO:0000269|PubMed:17449691}.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 1 family.
CC {ECO:0000305}.
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DR EMBL; AL009126; CAB12516.2; -; Genomic_DNA.
DR PIR; F69796; F69796.
DR RefSeq; NP_388578.2; NC_000964.3.
DR RefSeq; WP_003243860.1; NZ_JNCM01000032.1.
DR PDB; 4R6K; X-ray; 1.94 A; A=21-427.
DR PDB; 5Z6B; X-ray; 1.58 A; A=1-427.
DR PDB; 5Z6C; X-ray; 1.97 A; A=1-427.
DR PDBsum; 4R6K; -.
DR PDBsum; 5Z6B; -.
DR PDBsum; 5Z6C; -.
DR AlphaFoldDB; O31518; -.
DR SMR; O31518; -.
DR STRING; 224308.BSU06970; -.
DR PaxDb; O31518; -.
DR PRIDE; O31518; -.
DR EnsemblBacteria; CAB12516; CAB12516; BSU_06970.
DR GeneID; 936072; -.
DR KEGG; bsu:BSU06970; -.
DR PATRIC; fig|224308.179.peg.757; -.
DR eggNOG; COG1653; Bacteria.
DR InParanoid; O31518; -.
DR OMA; IMGYDRG; -.
DR PhylomeDB; O31518; -.
DR BioCyc; BSUB:BSU06970-MON; -.
DR Proteomes; UP000001570; Chromosome.
DR InterPro; IPR006059; SBP.
DR Pfam; PF13416; SBP_bac_8; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..427
FT /note="Putative ABC transporter substrate-binding protein
FT YesO"
FT /id="PRO_0000364347"
FT STRAND 35..40
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 43..59
FT /evidence="ECO:0007829|PDB:5Z6B"
FT STRAND 65..70
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 72..84
FT /evidence="ECO:0007829|PDB:5Z6B"
FT STRAND 90..94
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 96..103
FT /evidence="ECO:0007829|PDB:5Z6B"
FT TURN 104..106
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 112..116
FT /evidence="ECO:0007829|PDB:5Z6B"
FT STRAND 117..120
FT /evidence="ECO:0007829|PDB:4R6K"
FT HELIX 127..130
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 131..133
FT /evidence="ECO:0007829|PDB:5Z6B"
FT STRAND 141..143
FT /evidence="ECO:0007829|PDB:5Z6B"
FT STRAND 149..154
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 155..161
FT /evidence="ECO:0007829|PDB:5Z6B"
FT TURN 167..169
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 172..186
FT /evidence="ECO:0007829|PDB:5Z6B"
FT STRAND 187..190
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 197..207
FT /evidence="ECO:0007829|PDB:5Z6B"
FT STRAND 217..221
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 225..240
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 247..251
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 256..258
FT /evidence="ECO:0007829|PDB:5Z6B"
FT TURN 260..264
FT /evidence="ECO:0007829|PDB:5Z6B"
FT STRAND 265..272
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 275..282
FT /evidence="ECO:0007829|PDB:5Z6B"
FT STRAND 287..290
FT /evidence="ECO:0007829|PDB:5Z6B"
FT TURN 296..299
FT /evidence="ECO:0007829|PDB:5Z6B"
FT STRAND 302..305
FT /evidence="ECO:0007829|PDB:5Z6B"
FT STRAND 308..310
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 318..330
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 332..338
FT /evidence="ECO:0007829|PDB:5Z6B"
FT TURN 339..342
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 348..354
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 355..357
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 360..372
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 373..375
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 387..402
FT /evidence="ECO:0007829|PDB:5Z6B"
FT HELIX 408..423
FT /evidence="ECO:0007829|PDB:5Z6B"
SQ SEQUENCE 427 AA; 48332 MW; FC7DBA7681648111 CRC64;
MKKICYVLLS LVCVFLFSGC SAGEEASGKK EDVTLRIAWW GGQPRHDYTT KVIELYEKKN
PHVHIEAEFA NWDDYWKKLA PMSAAGQLPD VIQMDTAYLA QYGKKNQLED LTPYTKDGTI
DVSSIDENML SGGKIDNKLY GFTLGVNVLS VIANEDLLKK AGVSINQENW TWEDYEKLAY
DLQEKAGVYG SNGMHPPDIF FPYYLRTKGE RFYKEDGTGL AYQDDQLFVD YFERQLRLVK
AKTSPTPDES AQIKGMEDDF IVKGKSAITW NYSNQYLGFA RLTDSPLSLY LPPEQMQEKA
LTLKPSMLFS IPKSSEHKKE AAKFINFFVN NEEANQLIKG ERGVPVSDKV ADAIKPKLNE
EETNIVEYVE TASKNISKAD PPEPVGSAEV IKLLKDTSDQ ILYQKVSPEK AAKTFRKKAN
EILERNN
