YF1BA_XENLA
ID YF1BA_XENLA Reviewed; 300 AA.
AC Q6GN58; Q6GNA0;
DT 23-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 50.
DE RecName: Full=Protein YIF1B-A;
DE AltName: Full=YIP1-interacting factor homolog B-A;
GN Name=yif1b-a;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo, and Ovary;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Involved in the anterograde traffic pathway from the
CC endoplasmic reticulum to the plasma membrane and the organization of
CC the Golgi architecture. {ECO:0000250|UniProtKB:Q9CX30}.
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane
CC {ECO:0000250|UniProtKB:Q5BJH7}; Multi-pass membrane protein
CC {ECO:0000255}. Golgi apparatus membrane {ECO:0000250|UniProtKB:Q5BJH7};
CC Multi-pass membrane protein {ECO:0000255}. Endoplasmic reticulum-Golgi
CC intermediate compartment membrane {ECO:0000250|UniProtKB:Q5BJH7};
CC Multi-pass membrane protein {ECO:0000255}. Note=Shuttles between the
CC endoplasmic reticulum, the intermediate compartment and the Golgi
CC apparatus. {ECO:0000250|UniProtKB:Q5BJH7}.
CC -!- SIMILARITY: Belongs to the YIF1 family. {ECO:0000305}.
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DR EMBL; BC073615; AAH73615.1; -; mRNA.
DR EMBL; BC073660; AAH73660.1; -; mRNA.
DR EMBL; BC097659; AAH97659.1; -; mRNA.
DR RefSeq; NP_001085297.1; NM_001091828.1.
DR AlphaFoldDB; Q6GN58; -.
DR DNASU; 443676; -.
DR GeneID; 443676; -.
DR CTD; 443676; -.
DR Xenbase; XB-GENE-6251988; yif1b.S.
DR OMA; GWFFQVM; -.
DR OrthoDB; 1256839at2759; -.
DR Proteomes; UP000186698; Genome assembly.
DR Bgee; 443676; Expressed in blastula and 19 other tissues.
DR GO; GO:0005783; C:endoplasmic reticulum; ISS:UniProtKB.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; ISS:UniProtKB.
DR GO; GO:0033116; C:endoplasmic reticulum-Golgi intermediate compartment membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005794; C:Golgi apparatus; ISS:UniProtKB.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; IEA:InterPro.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR InterPro; IPR005578; Yif1_fam.
DR PANTHER; PTHR14083; PTHR14083; 1.
DR Pfam; PF03878; YIF1; 1.
PE 2: Evidence at transcript level;
KW Endoplasmic reticulum; Golgi apparatus; Membrane; Protein transport;
KW Reference proteome; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..300
FT /note="Protein YIF1B-A"
FT /id="PRO_0000307262"
FT TOPO_DOM 1..142
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 143..163
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 164..178
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 179..199
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 200..205
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 206..226
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 227
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 228..248
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 249..278
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 279..299
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 300
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT REGION 1..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 300 AA; 33319 MW; 66008DBC01799E05 CRC64;
MNQESSFRAP PKRRARGSNP NVSTPHQLFD DTSGGPVPHG GEYPNHSSPA LGIPAQAFLS
EPMSNFAMAY GSSLASQGKE MMDKNIDRII PVSKIKYYFA VDTVYVGKKI GLLMFPYMHQ
DWEVRYQQDT PVAPRFDINA PDLYIPVMAF VTYILVAGLA LGTQSRFSPE ILGMQASSAL
AWLIVEVLAI LLSLYLVTVN TDLTTVDLVA FTGYKYVGMI SGVISGLLFG KTGYYIVLAW
CCISIVFFMI RTLRLKILSE AAAEGVLVRG ARNQLRMYLT MAIAAVQPIF MYWLTYHLVR