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YFBU_ECOLI
ID   YFBU_ECOLI              Reviewed;         164 AA.
AC   P0A8W8; P76492; Q2MAM1;
DT   07-JUN-2005, integrated into UniProtKB/Swiss-Prot.
DT   07-JUN-2005, sequence version 1.
DT   03-AUG-2022, entry version 112.
DE   RecName: Full=UPF0304 protein YfbU;
GN   Name=yfbU; OrderedLocusNames=b2294, JW2291;
OS   Escherichia coli (strain K12).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83333;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA   Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA   Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA   Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA   Shao Y.;
RT   "The complete genome sequence of Escherichia coli K-12.";
RL   Science 277:1453-1462(1997).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=16738553; DOI=10.1038/msb4100049;
RA   Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA   Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT   "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT   and W3110.";
RL   Mol. Syst. Biol. 2:E1-E5(2006).
RN   [3]
RP   IDENTIFICATION BY MASS SPECTROMETRY.
RC   STRAIN=B / BL21;
RX   PubMed=10493123;
RX   DOI=10.1002/(sici)1522-2683(19990801)20:11<2181::aid-elps2181>3.0.co;2-q;
RA   Fountoulakis M., Takacs M.-F., Berndt P., Langen H., Takacs B.;
RT   "Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite
RT   chromatography.";
RL   Electrophoresis 20:2181-2195(1999).
RN   [4]
RP   INDUCTION.
RC   STRAIN=K12 / MC4100 / ATCC 35695 / DSM 6574;
RX   PubMed=21944167; DOI=10.1016/j.cell.2011.07.047;
RA   Vesper O., Amitai S., Belitsky M., Byrgazov K., Kaberdina A.C.,
RA   Engelberg-Kulka H., Moll I.;
RT   "Selective translation of leaderless mRNAs by specialized ribosomes
RT   generated by MazF in Escherichia coli.";
RL   Cell 147:147-157(2011).
CC   -!- INDUCTION: Only a leaderless mRNA has been detected in vivo, the first
CC       nucleotide is the beginning of the start codon.
CC       {ECO:0000269|PubMed:21944167}.
CC   -!- SIMILARITY: Belongs to the UPF0304 family. {ECO:0000305}.
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DR   EMBL; U00096; AAC75354.2; -; Genomic_DNA.
DR   EMBL; AP009048; BAE76685.1; -; Genomic_DNA.
DR   RefSeq; NP_416797.2; NC_000913.3.
DR   RefSeq; WP_000426124.1; NZ_STEB01000008.1.
DR   AlphaFoldDB; P0A8W8; -.
DR   SMR; P0A8W8; -.
DR   BioGRID; 4262966; 24.
DR   DIP; DIP-48184N; -.
DR   IntAct; P0A8W8; 11.
DR   STRING; 511145.b2294; -.
DR   jPOST; P0A8W8; -.
DR   PaxDb; P0A8W8; -.
DR   PRIDE; P0A8W8; -.
DR   EnsemblBacteria; AAC75354; AAC75354; b2294.
DR   EnsemblBacteria; BAE76685; BAE76685; BAE76685.
DR   GeneID; 66673823; -.
DR   GeneID; 946767; -.
DR   KEGG; ecj:JW2291; -.
DR   KEGG; eco:b2294; -.
DR   PATRIC; fig|511145.12.peg.2388; -.
DR   EchoBASE; EB3858; -.
DR   eggNOG; COG3013; Bacteria.
DR   HOGENOM; CLU_101021_1_0_6; -.
DR   InParanoid; P0A8W8; -.
DR   OMA; MYHALQV; -.
DR   PhylomeDB; P0A8W8; -.
DR   BioCyc; EcoCyc:G7188-MON; -.
DR   PRO; PR:P0A8W8; -.
DR   Proteomes; UP000000318; Chromosome.
DR   Proteomes; UP000000625; Chromosome.
DR   GO; GO:0005829; C:cytosol; IDA:EcoCyc.
DR   GO; GO:0042802; F:identical protein binding; IDA:EcoCyc.
DR   GO; GO:0006974; P:cellular response to DNA damage stimulus; IMP:EcoCyc.
DR   Gene3D; 1.10.287.680; -; 1.
DR   Gene3D; 1.10.3190.10; -; 1.
DR   HAMAP; MF_00762; UPF0304; 1.
DR   InterPro; IPR005587; UPF0304_YfbU.
DR   InterPro; IPR023146; YfbU_alpha-helical_sf.
DR   InterPro; IPR023145; YfbU_helix-hairpin_sf.
DR   Pfam; PF03887; YfbU; 1.
DR   PIRSF; PIRSF006272; UCP006272; 1.
PE   1: Evidence at protein level;
KW   Reference proteome.
FT   CHAIN           1..164
FT                   /note="UPF0304 protein YfbU"
FT                   /id="PRO_0000218162"
SQ   SEQUENCE   164 AA;  19536 MW;  5599DD48CB373921 CRC64;
     MEMTNAQRLI LSNQYKMMTM LDPANAERYR RLQTIIERGY GLQMRELDRE FGELKEETCR
     TIIDIMEMYH ALHVSWSNLQ DQQSIDERRV TFLGFDAATE ARYLGYVRFM VNVEGRYTHF
     DAGTHGFNAQ TPMWEKYQRM LNVWHACPRQ YHLSANEINQ IINA
 
 
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