YFED_ECOLI
ID YFED_ECOLI Reviewed; 130 AA.
AC P27238;
DT 01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
DT 24-NOV-2009, sequence version 3.
DT 03-AUG-2022, entry version 134.
DE RecName: Full=Uncharacterized protein YfeD;
GN Name=yfeD; OrderedLocusNames=b2399, JW2394;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12;
RX PubMed=2201776; DOI=10.1016/0022-2836(90)90339-n;
RA Brun Y.V., Breton R., Lanouette P., Lapointe J.;
RT "Precise mapping and comparison of two evolutionarily related regions of
RT the Escherichia coli K-12 chromosome. Evolution of valU and lysT from an
RT ancestral tRNA operon.";
RL J. Mol. Biol. 214:825-843(1990).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9205837; DOI=10.1093/dnares/4.2.91;
RA Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K.,
RA Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T., Oyama S.,
RA Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H.,
RA Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.;
RT "Construction of a contiguous 874-kb sequence of the Escherichia coli-K12
RT genome corresponding to 50.0-68.8 min on the linkage map and analysis of
RT its sequence features.";
RL DNA Res. 4:91-113(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
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DR EMBL; M13687; AAA65716.1; -; Genomic_DNA.
DR EMBL; X63976; CAA45392.1; -; Genomic_DNA.
DR EMBL; U00096; AAC75456.3; -; Genomic_DNA.
DR EMBL; AP009048; BAA16271.1; -; Genomic_DNA.
DR PIR; S11409; S11409.
DR RefSeq; NP_416898.3; NC_000913.3.
DR RefSeq; WP_000826503.1; NZ_CP047127.1.
DR AlphaFoldDB; P27238; -.
DR BioGRID; 4260571; 9.
DR DIP; DIP-12013N; -.
DR IntAct; P27238; 5.
DR STRING; 511145.b2399; -.
DR jPOST; P27238; -.
DR PaxDb; P27238; -.
DR PRIDE; P27238; -.
DR EnsemblBacteria; AAC75456; AAC75456; b2399.
DR EnsemblBacteria; BAA16271; BAA16271; BAA16271.
DR GeneID; 66673732; -.
DR GeneID; 946865; -.
DR KEGG; ecj:JW2394; -.
DR KEGG; eco:b2399; -.
DR PATRIC; fig|511145.12.peg.2494; -.
DR EchoBASE; EB1402; -.
DR eggNOG; COG3415; Bacteria.
DR HOGENOM; CLU_168146_0_0_6; -.
DR OMA; LIHIDAR; -.
DR PhylomeDB; P27238; -.
DR BioCyc; EcoCyc:EG11432-MON; -.
DR PRO; PR:P27238; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; -; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR009061; DNA-bd_dom_put_sf.
DR InterPro; IPR010749; DUF1323.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR Pfam; PF07037; DUF1323; 1.
DR SUPFAM; SSF46955; SSF46955; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..130
FT /note="Uncharacterized protein YfeD"
FT /id="PRO_0000169220"
SQ SEQUENCE 130 AA; 14910 MW; DED9F2885E478B70 CRC64;
MKRLRNKMTT EELAECLGVA KQTVNRWIRE KGWKTEKFPG VKGGRARLIL VDTQVCEFIQ
NTPAFHNTPM LMEAEERIAE YAPGARAPAY RQIINAIDNM TDIEQEKVAQ FLSREGIRNF
LARLDIDESA