YFFB_LACLA
ID YFFB_LACLA Reviewed; 156 AA.
AC Q48660;
DT 15-JUL-1999, integrated into UniProtKB/Swiss-Prot.
DT 27-APR-2001, sequence version 2.
DT 25-MAY-2022, entry version 110.
DE RecName: Full=Putative HTH-type transcriptional regulator YffB;
GN Name=yffB; OrderedLocusNames=LL0558; ORFNames=L153086;
OS Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae;
OC Lactococcus.
OX NCBI_TaxID=272623;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=LM0230;
RX PubMed=7773380; DOI=10.1099/13500872-141-4-1027;
RA Cancilla M.R., Hillier A.J., Davidson B.E.;
RT "Lactococcus lactis glyceraldehyde-3-phosphate dehydrogenase gene, gap:
RT further evidence for strongly biased codon usage in glycolytic pathway
RT genes.";
RL Microbiology 141:1027-1036(1995).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IL1403;
RX PubMed=11337471; DOI=10.1101/gr.gr-1697r;
RA Bolotin A., Wincker P., Mauger S., Jaillon O., Malarme K., Weissenbach J.,
RA Ehrlich S.D., Sorokin A.;
RT "The complete genome sequence of the lactic acid bacterium Lactococcus
RT lactis ssp. lactis IL1403.";
RL Genome Res. 11:731-753(2001).
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DR EMBL; L36907; AAC41452.1; -; Genomic_DNA.
DR EMBL; AE005176; AAK04656.1; -; Genomic_DNA.
DR PIR; F86694; F86694.
DR RefSeq; NP_266714.1; NC_002662.1.
DR RefSeq; WP_010905440.1; NC_002662.1.
DR AlphaFoldDB; Q48660; -.
DR SMR; Q48660; -.
DR STRING; 272623.L153086; -.
DR PaxDb; Q48660; -.
DR EnsemblBacteria; AAK04656; AAK04656; L153086.
DR KEGG; lla:L153086; -.
DR PATRIC; fig|272623.7.peg.596; -.
DR eggNOG; COG1959; Bacteria.
DR HOGENOM; CLU_107144_1_0_9; -.
DR OMA; HCCAILA; -.
DR Proteomes; UP000002196; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR030489; TR_Rrf2-type_CS.
DR InterPro; IPR000944; Tscrpt_reg_Rrf2.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR33221; PTHR33221; 1.
DR Pfam; PF02082; Rrf2; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR TIGRFAMs; TIGR00738; rrf2_super; 1.
DR PROSITE; PS01332; HTH_RRF2_1; 1.
DR PROSITE; PS51197; HTH_RRF2_2; 1.
PE 4: Predicted;
KW DNA-binding; Reference proteome.
FT CHAIN 1..156
FT /note="Putative HTH-type transcriptional regulator YffB"
FT /id="PRO_0000109570"
FT DOMAIN 2..137
FT /note="HTH rrf2-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00540"
FT CONFLICT 59
FT /note="P -> T (in Ref. 1; AAC41452)"
FT /evidence="ECO:0000305"
FT CONFLICT 70
FT /note="E -> D (in Ref. 1; AAC41452)"
FT /evidence="ECO:0000305"
FT CONFLICT 102
FT /note="S -> A (in Ref. 1; AAC41452)"
FT /evidence="ECO:0000305"
FT CONFLICT 108..109
FT /note="KR -> QH (in Ref. 1; AAC41452)"
FT /evidence="ECO:0000305"
FT CONFLICT 114
FT /note="S -> T (in Ref. 1; AAC41452)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 156 AA; 17452 MW; 2326829ACB398625 CRC64;
MKLSSGWEQS VYVLLILARL PENRTMSSIA LANRLKVSPS YLKKIIKSLV DEGLLRSTPG
KNGGFSLNKE LHDISFYDVF LAIEGRGRIF QSQGLLQNFI GSESGKAKRC AITSALDEIE
NTLVRTLSNV SLAQVADETQ YNYNLGYLDE WIDEMD