YFIB_ECOLI
ID YFIB_ECOLI Reviewed; 160 AA.
AC P07021;
DT 01-APR-1988, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1992, sequence version 2.
DT 03-AUG-2022, entry version 156.
DE RecName: Full=Putative lipoprotein YfiB;
DE Flags: Precursor;
GN Name=yfiB; OrderedLocusNames=b2605, JW2586;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=6357787; DOI=10.1002/j.1460-2075.1983.tb01519.x;
RA Bystroem A.S., Hjalmarsson K.J., Wikstroem P.M., Bjoerk G.R.;
RT "The nucleotide sequence of an Escherichia coli operon containing genes for
RT the tRNA(m1G)methyltransferase, the ribosomal proteins S16 and L19 and a
RT 21-K polypeptide.";
RL EMBO J. 2:899-905(1983).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9205837; DOI=10.1093/dnares/4.2.91;
RA Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K.,
RA Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T., Oyama S.,
RA Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H.,
RA Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.;
RT "Construction of a contiguous 874-kb sequence of the Escherichia coli-K12
RT genome corresponding to 50.0-68.8 min on the linkage map and analysis of
RT its sequence features.";
RL DNA Res. 4:91-113(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP SHOWS THAT THE PROTEIN IS EXPRESSED.
RX PubMed=6298574; DOI=10.1007/bf00330047;
RA Bystroem A.S., Bjoerk G.R.;
RT "The structural gene (trmD) for the tRNA(m1G)methyltransferase is part of a
RT four polypeptide operon in Escherichia coli K-12.";
RL Mol. Gen. Genet. 188:447-454(1982).
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000255|PROSITE-
CC ProRule:PRU00303}; Lipid-anchor {ECO:0000255|PROSITE-ProRule:PRU00303}.
CC -!- SIMILARITY: Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA25961.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; X01818; CAA25961.1; ALT_INIT; Genomic_DNA.
DR EMBL; U00096; AAC75654.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA16490.1; -; Genomic_DNA.
DR PIR; H65038; H65038.
DR RefSeq; NP_417096.1; NC_000913.3.
DR RefSeq; WP_000589847.1; NZ_LN832404.1.
DR AlphaFoldDB; P07021; -.
DR SMR; P07021; -.
DR BioGRID; 4260617; 241.
DR DIP; DIP-12056N; -.
DR IntAct; P07021; 1.
DR STRING; 511145.b2605; -.
DR TCDB; 1.B.6.1.21; the ompa-ompf porin (oop) family.
DR PaxDb; P07021; -.
DR PRIDE; P07021; -.
DR EnsemblBacteria; AAC75654; AAC75654; b2605.
DR EnsemblBacteria; BAA16490; BAA16490; BAA16490.
DR GeneID; 947094; -.
DR KEGG; ecj:JW2586; -.
DR KEGG; eco:b2605; -.
DR PATRIC; fig|1411691.4.peg.4134; -.
DR EchoBASE; EB1141; -.
DR eggNOG; COG2885; Bacteria.
DR HOGENOM; CLU_016890_12_3_6; -.
DR InParanoid; P07021; -.
DR OMA; TDEGWAF; -.
DR PhylomeDB; P07021; -.
DR BioCyc; EcoCyc:EG11152-MON; -.
DR PRO; PR:P07021; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:InterPro.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR CDD; cd07185; OmpA_C-like; 1.
DR Gene3D; 3.30.1330.60; -; 1.
DR InterPro; IPR006664; OMP_bac.
DR InterPro; IPR006665; OmpA-like.
DR InterPro; IPR036737; OmpA-like_sf.
DR Pfam; PF00691; OmpA; 1.
DR PRINTS; PR01021; OMPADOMAIN.
DR SUPFAM; SSF103088; SSF103088; 1.
DR PROSITE; PS51123; OMPA_2; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Cell membrane; Lipoprotein; Membrane; Palmitate; Reference proteome;
KW Signal.
FT SIGNAL 1..18
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT CHAIN 19..160
FT /note="Putative lipoprotein YfiB"
FT /id="PRO_0000020137"
FT DOMAIN 43..160
FT /note="OmpA-like"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00473"
FT LIPID 19
FT /note="N-palmitoyl cysteine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT LIPID 19
FT /note="S-diacylglycerol cysteine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
SQ SEQUENCE 160 AA; 17245 MW; 33FE5FBB174B7889 CRC64;
MIKHLVAPLV FTSLILTGCQ SPQGKFTPEQ VAAMQSYGFT ESAGDWSLGL SDAILFAKND
YKLLPESQQQ IQTMAAKLAS TGLTHARMDG HTDNYGEDSY NEGLSLKRAN VVADAWAMGG
QIPRSNLTTQ GLGKKYPIAS NKTAQGRAEN RRVAVVITTP
