ID   YFIF_BACSU              Reviewed;         314 AA.
AC   P54722;
DT   01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-1996, sequence version 1.
DT   03-AUG-2022, entry version 138.
DE   RecName: Full=Uncharacterized HTH-type transcriptional regulator YfiF;
GN   Name=yfiF; OrderedLocusNames=BSU08250;
OS   Bacillus subtilis (strain 168).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX   NCBI_TaxID=224308;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=8704981; DOI=10.1099/13500872-142-6-1417;
RA   Yamamoto H., Uchiyama S., Fajar A.N., Ogasawara N., Sekiguchi J.;
RT   "Determination of a 12 kb nucleotide sequence around the 76 degrees region
RT   of the Bacillus subtilis chromosome.";
RL   Microbiology 142:1417-1421(1996).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=168;
RX   PubMed=9384377; DOI=10.1038/36786;
RA   Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA   Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA   Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA   Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA   Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA   Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA   Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA   Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA   Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA   Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA   Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA   Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA   Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA   Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA   Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA   Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA   Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA   Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA   Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA   Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA   Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA   Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA   Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA   Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA   Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA   Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA   Yoshikawa H., Danchin A.;
RT   "The complete genome sequence of the Gram-positive bacterium Bacillus
RT   subtilis.";
RL   Nature 390:249-256(1997).
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DR   EMBL; D50543; BAA09110.1; -; Genomic_DNA.
DR   EMBL; AL009126; CAB12654.1; -; Genomic_DNA.
DR   PIR; A69803; A69803.
DR   RefSeq; NP_388706.1; NC_000964.3.
DR   RefSeq; WP_003243004.1; NZ_JNCM01000032.1.
DR   AlphaFoldDB; P54722; -.
DR   SMR; P54722; -.
DR   STRING; 224308.BSU08250; -.
DR   PaxDb; P54722; -.
DR   PRIDE; P54722; -.
DR   EnsemblBacteria; CAB12654; CAB12654; BSU_08250.
DR   GeneID; 939704; -.
DR   KEGG; bsu:BSU08250; -.
DR   PATRIC; fig|224308.179.peg.891; -.
DR   eggNOG; COG1917; Bacteria.
DR   eggNOG; COG4977; Bacteria.
DR   InParanoid; P54722; -.
DR   OMA; VHYFTRV; -.
DR   PhylomeDB; P54722; -.
DR   BioCyc; BSUB:BSU08250-MON; -.
DR   Proteomes; UP000001570; Chromosome.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   Gene3D; 2.60.120.10; -; 1.
DR   InterPro; IPR003313; AraC-bd.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR037923; HTH-like.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   InterPro; IPR014710; RmlC-like_jellyroll.
DR   Pfam; PF02311; AraC_binding; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; SSF46689; 2.
DR   SUPFAM; SSF51215; SSF51215; 1.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
KW   DNA-binding; Reference proteome; Transcription; Transcription regulation.
FT   CHAIN           1..314
FT                   /note="Uncharacterized HTH-type transcriptional regulator
FT                   YfiF"
FT                   /id="PRO_0000194620"
FT   DOMAIN          192..289
FT                   /note="HTH araC/xylS-type"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
FT   DNA_BIND        209..230
FT                   /note="H-T-H motif"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
FT   DNA_BIND        257..279
FT                   /note="H-T-H motif"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
SQ   SEQUENCE   314 AA;  36197 MW;  AD4BC269431B6037 CRC64;
     MELNHLVTGK IALNQYVHRL EQKDVSFYVH YWGAMTNHYN TLLHKHSFYE ICYVVRGEGY
     YLEGDRTYPL REQTIFLSKP EHLHQIKSET GLFLFYVAFE LSEDQSSAEW IKVMEEVKQS
     PFITMQLKDG EPPGLLWKTL MLQAAQPVNA FDKEILSHLS HALILSLIQT FLPYAQRPKQ
     KQPIHTSSAL LTEVKLHIKD NLSQPLKLTD VASHFHISGR HLSRLFAAEL GVSYSEFVQN
     EKINKAAELL KSTNLSIKEI AEEIGFSVHY FTRVFSAKIG SSPGLFRSLY KDSKMTAFQI
     NKPFQKIEQA KPHE