YFKH_BACSU
ID YFKH_BACSU Reviewed; 275 AA.
AC O34437; Q79EY0;
DT 07-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=Putative ribonuclease-like protein YfkH;
GN Name=yfkH; OrderedLocusNames=BSU07900;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168 / AC327;
RX PubMed=8969503; DOI=10.1099/13500872-142-11-3057;
RA Yamamoto H., Uchiyama S., Sekiguchi J.;
RT "Cloning and sequencing of a 40.6 kb segment in the 73 degrees-76 degrees
RT region of the Bacillus subtilis chromosome containing genes for trehalose
RT metabolism and acetoin utilization.";
RL Microbiology 142:3057-3065(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
RN [3]
RP DISCUSSION OF SEQUENCE.
RX PubMed=11222749; DOI=10.1093/nar/29.5.1017;
RA Zuo Y., Deutscher M.P.;
RT "Exoribonuclease superfamilies: structural analysis and phylogenetic
RT distribution.";
RL Nucleic Acids Res. 29:1017-1026(2001).
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
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DR EMBL; D83967; BAA23398.1; -; Genomic_DNA.
DR EMBL; AL009126; CAB12619.1; -; Genomic_DNA.
DR PIR; C69808; C69808.
DR RefSeq; NP_388671.1; NC_000964.3.
DR RefSeq; WP_003242564.1; NZ_JNCM01000032.1.
DR AlphaFoldDB; O34437; -.
DR STRING; 224308.BSU07900; -.
DR PaxDb; O34437; -.
DR EnsemblBacteria; CAB12619; CAB12619; BSU_07900.
DR GeneID; 936134; -.
DR KEGG; bsu:BSU07900; -.
DR PATRIC; fig|224308.179.peg.854; -.
DR eggNOG; COG1295; Bacteria.
DR InParanoid; O34437; -.
DR OMA; KQPKFRW; -.
DR PhylomeDB; O34437; -.
DR BioCyc; BSUB:BSU07900-MON; -.
DR Proteomes; UP000001570; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR InterPro; IPR017039; Virul_fac_BrkB.
DR PANTHER; PTHR30213; PTHR30213; 1.
DR Pfam; PF03631; Virul_fac_BrkB; 1.
DR PIRSF; PIRSF035875; RNase_BN; 1.
DR TIGRFAMs; TIGR00765; yihY_not_rbn; 1.
PE 4: Predicted;
KW Cell membrane; Exonuclease; Hydrolase; Membrane; Nuclease;
KW Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..275
FT /note="Putative ribonuclease-like protein YfkH"
FT /id="PRO_0000379508"
FT TRANSMEM 23..43
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 83..103
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 126..146
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 172..192
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 199..219
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 235..255
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 275 AA; 30469 MW; C5B781AA2EBCF3B1 CRC64;
MSFLKELFSR YTLHEGQSKS AELAYFFLLS LFPFLIFMLT LTAYLPLSTD DVLGVIEQYA
PASAMSLVES ITHQTLNNRN GGLLSFGIIA ALWSASNGMN AIVRSLNHAY DVEENRSFII
VRLTSIFLTI AMVFTILVAL LLPVFGREIG RLASDFVGAS DLFLSVWAAI RWGVSPLVLL
IVFSALYVIA PNKKLSLRFV MPGAVFATIG WIIVSTLFSF YVSTFANYSA TYGSIGGIIV
LMIWFYLSGI LIILGGEINA LLHKRKKLPD ENPYH