YFLN_BACSU
ID YFLN_BACSU Reviewed; 264 AA.
AC O34409;
DT 06-JUN-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Probable metallo-hydrolase YflN;
DE EC=3.-.-.-;
GN Name=yflN; OrderedLocusNames=BSU07620;
OS Bacillus subtilis (strain 168).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.
OX NCBI_TaxID=224308;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=168 / AC327;
RX PubMed=9272861; DOI=10.1016/s0378-1119(97)00130-3;
RA Yamamoto H., Uchiyama S., Nugroho F.A., Sekiguchi J.;
RT "Cloning and sequencing of a 35.7 kb in the 70 degree-73 degree region of
RT the Bacillus subtilis genome reveal genes for a new two-component system,
RT three spore germination proteins, an iron uptake system and a general
RT stress response protein.";
RL Gene 194:191-199(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=168;
RX PubMed=9384377; DOI=10.1038/36786;
RA Kunst F., Ogasawara N., Moszer I., Albertini A.M., Alloni G., Azevedo V.,
RA Bertero M.G., Bessieres P., Bolotin A., Borchert S., Borriss R.,
RA Boursier L., Brans A., Braun M., Brignell S.C., Bron S., Brouillet S.,
RA Bruschi C.V., Caldwell B., Capuano V., Carter N.M., Choi S.-K.,
RA Codani J.-J., Connerton I.F., Cummings N.J., Daniel R.A., Denizot F.,
RA Devine K.M., Duesterhoeft A., Ehrlich S.D., Emmerson P.T., Entian K.-D.,
RA Errington J., Fabret C., Ferrari E., Foulger D., Fritz C., Fujita M.,
RA Fujita Y., Fuma S., Galizzi A., Galleron N., Ghim S.-Y., Glaser P.,
RA Goffeau A., Golightly E.J., Grandi G., Guiseppi G., Guy B.J., Haga K.,
RA Haiech J., Harwood C.R., Henaut A., Hilbert H., Holsappel S., Hosono S.,
RA Hullo M.-F., Itaya M., Jones L.-M., Joris B., Karamata D., Kasahara Y.,
RA Klaerr-Blanchard M., Klein C., Kobayashi Y., Koetter P., Koningstein G.,
RA Krogh S., Kumano M., Kurita K., Lapidus A., Lardinois S., Lauber J.,
RA Lazarevic V., Lee S.-M., Levine A., Liu H., Masuda S., Mauel C.,
RA Medigue C., Medina N., Mellado R.P., Mizuno M., Moestl D., Nakai S.,
RA Noback M., Noone D., O'Reilly M., Ogawa K., Ogiwara A., Oudega B.,
RA Park S.-H., Parro V., Pohl T.M., Portetelle D., Porwollik S.,
RA Prescott A.M., Presecan E., Pujic P., Purnelle B., Rapoport G., Rey M.,
RA Reynolds S., Rieger M., Rivolta C., Rocha E., Roche B., Rose M., Sadaie Y.,
RA Sato T., Scanlan E., Schleich S., Schroeter R., Scoffone F., Sekiguchi J.,
RA Sekowska A., Seror S.J., Serror P., Shin B.-S., Soldo B., Sorokin A.,
RA Tacconi E., Takagi T., Takahashi H., Takemaru K., Takeuchi M.,
RA Tamakoshi A., Tanaka T., Terpstra P., Tognoni A., Tosato V., Uchiyama S.,
RA Vandenbol M., Vannier F., Vassarotti A., Viari A., Wambutt R., Wedler E.,
RA Wedler H., Weitzenegger T., Winters P., Wipat A., Yamamoto H., Yamane K.,
RA Yasumoto K., Yata K., Yoshida K., Yoshikawa H.-F., Zumstein E.,
RA Yoshikawa H., Danchin A.;
RT "The complete genome sequence of the Gram-positive bacterium Bacillus
RT subtilis.";
RL Nature 390:249-256(1997).
RN [3]
RP TRANSCRIPTIONAL REGULATION.
RC STRAIN=168;
RX PubMed=10972810; DOI=10.1046/j.1365-2958.2000.02055.x;
RA Yamamoto H., Murata M., Sekiguchi J.;
RT "The CitST two-component system regulates the expression of the Mg-citrate
RT transporter in Bacillus subtilis.";
RL Mol. Microbiol. 37:898-912(2000).
RN [4]
RP TRANSCRIPTIONAL REGULATION.
RC STRAIN=168;
RX PubMed=11029430; DOI=10.1128/jb.182.21.6099-6105.2000;
RA Warner J.B., Krom B.P., Magni C., Konings W.N., Lolkema J.S.;
RT "Catabolite repression and induction of the Mg(2+)-citrate transporter CitM
RT of Bacillus subtilis.";
RL J. Bacteriol. 182:6099-6105(2000).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250};
CC Note=Binds 2 Zn(2+) ions per subunit. {ECO:0000250};
CC -!- INDUCTION: Expression is under strict control of the medium
CC composition. Induced by citrate, probably via the two-component
CC regulatory system CitT/CitS. Repressed by rapidly metabolized carbon
CC sources like glucose, glycerol and inositol, via the carbon catabolite
CC repression system. Is also repressed by succinate and glutamate, albeit
CC to a lesser extent. {ECO:0000269|PubMed:10972810,
CC ECO:0000269|PubMed:11029430}.
CC -!- SIMILARITY: Belongs to the metallo-beta-lactamase superfamily.
CC {ECO:0000305}.
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DR EMBL; D86417; BAA22307.1; -; Genomic_DNA.
DR EMBL; AL009126; CAB12591.1; -; Genomic_DNA.
DR PIR; D69811; D69811.
DR RefSeq; NP_388643.1; NC_000964.3.
DR RefSeq; WP_009966790.1; NZ_JNCM01000032.1.
DR AlphaFoldDB; O34409; -.
DR SMR; O34409; -.
DR STRING; 224308.BSU07620; -.
DR PaxDb; O34409; -.
DR EnsemblBacteria; CAB12591; CAB12591; BSU_07620.
DR GeneID; 936120; -.
DR KEGG; bsu:BSU07620; -.
DR PATRIC; fig|224308.179.peg.828; -.
DR eggNOG; COG0491; Bacteria.
DR InParanoid; O34409; -.
DR OMA; PGWRWLH; -.
DR PhylomeDB; O34409; -.
DR BioCyc; BSUB:BSU07620-MON; -.
DR Proteomes; UP000001570; Chromosome.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.60.15.10; -; 1.
DR InterPro; IPR001279; Metallo-B-lactamas.
DR InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR Pfam; PF00753; Lactamase_B; 1.
DR SMART; SM00849; Lactamase_B; 1.
DR SUPFAM; SSF56281; SSF56281; 1.
PE 2: Evidence at transcript level;
KW Hydrolase; Metal-binding; Reference proteome; Zinc.
FT CHAIN 1..264
FT /note="Probable metallo-hydrolase YflN"
FT /id="PRO_0000049536"
FT BINDING 80
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 82
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 84
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 85
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 169
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 188
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 188
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 241
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
SQ SEQUENCE 264 AA; 28830 MW; 776E7045A2762939 CRC64;
MSDPYMPLTS VRSGAGFEAA KGVHGLTVQI ANVYFIQLPS EPHSFVLIDA GMPQSAGVIV
NEAKQRFGEG FQLKAIILTH GHFDHIGAIE EILEHWDVPV YIHSREMPYV TGKEDYPPAR
PDSKSGLVAK LSPLFPRHSI DISSHVQALP EDGSVPFLDE WMWIATPGHT PGHISLFRDD
GRVLVAGDAV ITVEQEKMAD VLIQKQELHG PPAYFTPDTE TAAESILKLA GLEPEALLTG
HGIPMTGKNF RSDLTELANR LSSI