YGAM_ECOLI
ID YGAM_ECOLI Reviewed; 109 AA.
AC P0ADQ7; P77800; Q47413;
DT 06-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT 28-NOV-2012, sequence version 2.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Uncharacterized protein YgaM;
GN Name=ygaM; OrderedLocusNames=b2672, JW2647;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12;
RX PubMed=8820648; DOI=10.1046/j.1365-2958.1996.424950.x;
RA Jordan A., Aragall E., Gibert I., Barbe J.;
RT "Promoter identification and expression analysis of Salmonella typhimurium
RT and Escherichia coli nrdEF operons encoding one of two class I
RT ribonucleotide reductases present in both bacteria.";
RL Mol. Microbiol. 19:777-790(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=9205837; DOI=10.1093/dnares/4.2.91;
RA Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T.,
RA Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K.,
RA Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T., Oyama S.,
RA Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H.,
RA Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.;
RT "Construction of a contiguous 874-kb sequence of the Escherichia coli-K12
RT genome corresponding to 50.0-68.8 min on the linkage map and analysis of
RT its sequence features.";
RL DNA Res. 4:91-113(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP RIBOSOME-BINDING, AND INDUCTION.
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=22661687; DOI=10.1128/jb.00396-12;
RA Yoshida H., Maki Y., Furuike S., Sakai A., Ueta M., Wada A.;
RT "YqjD is an inner membrane protein associated with stationary-phase
RT ribosomes in Escherichia coli.";
RL J. Bacteriol. 194:4178-4183(2012).
CC -!- SUBUNIT: Upon overexpression binds to ribosomes.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000305}; Single-pass
CC membrane protein {ECO:0000305}.
CC -!- INDUCTION: Maximally expressed between 6 and 12 hours of growth, in
CC early stationary phase. {ECO:0000269|PubMed:22661687}.
CC -!- SIMILARITY: Belongs to the ElaB/YgaM/YqjD family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA16537.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
CC Sequence=CAA56183.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
CC Sequence=CAA56183.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; X79787; CAA56183.1; ALT_SEQ; Genomic_DNA.
DR EMBL; U00096; AAC75719.2; -; Genomic_DNA.
DR EMBL; AP009048; BAA16537.1; ALT_INIT; Genomic_DNA.
DR PIR; A65047; A65047.
DR RefSeq; NP_417158.4; NC_000913.3.
DR RefSeq; WP_001295174.1; NZ_STEB01000042.1.
DR AlphaFoldDB; P0ADQ7; -.
DR SMR; P0ADQ7; -.
DR BioGRID; 4261135; 14.
DR DIP; DIP-48124N; -.
DR IntAct; P0ADQ7; 5.
DR STRING; 511145.b2672; -.
DR jPOST; P0ADQ7; -.
DR PaxDb; P0ADQ7; -.
DR PRIDE; P0ADQ7; -.
DR EnsemblBacteria; AAC75719; AAC75719; b2672.
DR EnsemblBacteria; BAA16537; BAA16537; BAA16537.
DR GeneID; 66673458; -.
DR GeneID; 947157; -.
DR KEGG; ecj:JW2647; -.
DR KEGG; eco:b2672; -.
DR PATRIC; fig|1411691.4.peg.4069; -.
DR EchoBASE; EB3070; -.
DR eggNOG; COG4575; Bacteria.
DR HOGENOM; CLU_132623_4_1_6; -.
DR InParanoid; P0ADQ7; -.
DR PhylomeDB; P0ADQ7; -.
DR BioCyc; EcoCyc:B0899-MON; -.
DR PRO; PR:P0ADQ7; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0005829; C:cytosol; IDA:EcoCyc.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR InterPro; IPR043605; DUF883_C.
DR InterPro; IPR043604; DUF883_N.
DR InterPro; IPR010279; YqjD/ElaB.
DR PANTHER; PTHR35893; PTHR35893; 1.
DR Pfam; PF05957; DUF883; 1.
DR Pfam; PF19029; DUF883_C; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..109
FT /note="Uncharacterized protein YgaM"
FT /id="PRO_0000169297"
FT TRANSMEM 87..106
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 109 AA; 11847 MW; EA684649DB849E49 CRC64;
MFNRPNRNDV DDGVQDIQND VNQLADSLES VLKSWGSDAK GEAEAARSKA QALLKETRAR
MHGRTRVQQA ARDAVGCADS FVRERPWCSV GTAAAVGIFI GALLSMRKS
