YGDD_ECO57
ID YGDD_ECO57 Reviewed; 131 AA.
AC P0ADR4; P32065; Q46667;
DT 06-DEC-2005, integrated into UniProtKB/Swiss-Prot.
DT 06-DEC-2005, sequence version 1.
DT 03-AUG-2022, entry version 87.
DE RecName: Full=UPF0382 inner membrane protein YgdD;
GN Name=ygdD; OrderedLocusNames=Z4124, ECs3667;
OS Escherichia coli O157:H7.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83334;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=O157:H7 / EDL933 / ATCC 700927 / EHEC;
RX PubMed=11206551; DOI=10.1038/35054089;
RA Perna N.T., Plunkett G. III, Burland V., Mau B., Glasner J.D., Rose D.J.,
RA Mayhew G.F., Evans P.S., Gregor J., Kirkpatrick H.A., Posfai G.,
RA Hackett J., Klink S., Boutin A., Shao Y., Miller L., Grotbeck E.J.,
RA Davis N.W., Lim A., Dimalanta E.T., Potamousis K., Apodaca J.,
RA Anantharaman T.S., Lin J., Yen G., Schwartz D.C., Welch R.A.,
RA Blattner F.R.;
RT "Genome sequence of enterohaemorrhagic Escherichia coli O157:H7.";
RL Nature 409:529-533(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=O157:H7 / Sakai / RIMD 0509952 / EHEC;
RX PubMed=11258796; DOI=10.1093/dnares/8.1.11;
RA Hayashi T., Makino K., Ohnishi M., Kurokawa K., Ishii K., Yokoyama K.,
RA Han C.-G., Ohtsubo E., Nakayama K., Murata T., Tanaka M., Tobe T., Iida T.,
RA Takami H., Honda T., Sasakawa C., Ogasawara N., Yasunaga T., Kuhara S.,
RA Shiba T., Hattori M., Shinagawa H.;
RT "Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and
RT genomic comparison with a laboratory strain K-12.";
RL DNA Res. 8:11-22(2001).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the UPF0382 family. {ECO:0000305}.
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DR EMBL; AE005174; AAG57921.1; -; Genomic_DNA.
DR EMBL; BA000007; BAB37090.1; -; Genomic_DNA.
DR PIR; C91087; C91087.
DR PIR; E85932; E85932.
DR RefSeq; NP_311694.1; NC_002695.1.
DR RefSeq; WP_000203905.1; NZ_SWKA01000005.1.
DR AlphaFoldDB; P0ADR4; -.
DR STRING; 155864.EDL933_3988; -.
DR EnsemblBacteria; AAG57921; AAG57921; Z4124.
DR EnsemblBacteria; BAB37090; BAB37090; ECs_3667.
DR GeneID; 66673326; -.
DR GeneID; 916523; -.
DR KEGG; ece:Z4124; -.
DR KEGG; ecs:ECs_3667; -.
DR PATRIC; fig|386585.9.peg.3833; -.
DR eggNOG; COG2363; Bacteria.
DR HOGENOM; CLU_096548_3_2_6; -.
DR OMA; QFYHTFA; -.
DR Proteomes; UP000000558; Chromosome.
DR Proteomes; UP000002519; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR006696; DUF423.
DR PANTHER; PTHR43461; PTHR43461; 1.
DR Pfam; PF04241; DUF423; 1.
PE 3: Inferred from homology;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..131
FT /note="UPF0382 inner membrane protein YgdD"
FT /id="PRO_0000169330"
FT TOPO_DOM 1..4
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 5..25
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 26..64
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 65..85
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 86..97
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 98..118
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 119..131
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 131 AA; 14333 MW; 2EE9FD9B596012DD CRC64;
MTSRFMLIFA AISGFIFVAL GAFGAHVLSK TMGAVEMGWI QTGLEYQAFH TLAILGLAVA
MQRRISIWFY WSSVFLALGT VLFSGSLYCL ALSHLRLWAF VTPVGGVSFL AGWALMLVGA
IRLKRKGVSH E