ID   YGDQ_ECOLI              Reviewed;         237 AA.
AC   P67127; Q2MA05; Q46931;
DT   11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT   11-OCT-2004, sequence version 1.
DT   03-AUG-2022, entry version 105.
DE   RecName: Full=UPF0053 inner membrane protein YgdQ;
GN   Name=ygdQ; OrderedLocusNames=b2832, JW2800;
OS   Escherichia coli (strain K12).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83333;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA   Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA   Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA   Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA   Shao Y.;
RT   "The complete genome sequence of Escherichia coli K-12.";
RL   Science 277:1453-1462(1997).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=16738553; DOI=10.1038/msb4100049;
RA   Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA   Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT   "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT   and W3110.";
RL   Mol. Syst. Biol. 2:E1-E5(2006).
RN   [3]
RP   TOPOLOGY [LARGE SCALE ANALYSIS].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=15919996; DOI=10.1126/science.1109730;
RA   Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT   "Global topology analysis of the Escherichia coli inner membrane
RT   proteome.";
RL   Science 308:1321-1323(2005).
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC   -!- SIMILARITY: Belongs to the UPF0053 family. {ECO:0000305}.
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DR   EMBL; U29581; AAB40479.1; -; Genomic_DNA.
DR   EMBL; U00096; AAC75871.1; -; Genomic_DNA.
DR   EMBL; AP009048; BAE76901.1; -; Genomic_DNA.
DR   PIR; A65066; A65066.
DR   RefSeq; NP_417309.1; NC_000913.3.
DR   RefSeq; WP_000895624.1; NZ_STEB01000034.1.
DR   AlphaFoldDB; P67127; -.
DR   BioGRID; 4263142; 15.
DR   STRING; 511145.b2832; -.
DR   PaxDb; P67127; -.
DR   PRIDE; P67127; -.
DR   EnsemblBacteria; AAC75871; AAC75871; b2832.
DR   EnsemblBacteria; BAE76901; BAE76901; BAE76901.
DR   GeneID; 66673301; -.
DR   GeneID; 947295; -.
DR   KEGG; ecj:JW2800; -.
DR   KEGG; eco:b2832; -.
DR   PATRIC; fig|1411691.4.peg.3902; -.
DR   EchoBASE; EB2897; -.
DR   eggNOG; COG0861; Bacteria.
DR   HOGENOM; CLU_064910_0_0_6; -.
DR   InParanoid; P67127; -.
DR   OMA; IMFLDIV; -.
DR   PhylomeDB; P67127; -.
DR   BioCyc; EcoCyc:G7460-MON; -.
DR   PRO; PR:P67127; -.
DR   Proteomes; UP000000318; Chromosome.
DR   Proteomes; UP000000625; Chromosome.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR   InterPro; IPR005496; Integral_membrane_TerC.
DR   Pfam; PF03741; TerC; 1.
PE   1: Evidence at protein level;
KW   Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW   Transmembrane; Transmembrane helix.
FT   CHAIN           1..237
FT                   /note="UPF0053 inner membrane protein YgdQ"
FT                   /id="PRO_0000088366"
FT   TOPO_DOM        1..17
FT                   /note="Periplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        18..38
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        39..50
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        51..71
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        72..79
FT                   /note="Periplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        80..100
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        101..124
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        125..145
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        146..151
FT                   /note="Periplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        152..172
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        173..186
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        187..207
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        208..209
FT                   /note="Periplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        210..230
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        231..237
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
SQ   SEQUENCE   237 AA;  26157 MW;  E5680AB2054A0D8D CRC64;
     MLFAWITDPN AWLALGTLTL LEIVLGIDNI IFLSLVVAKL PTAQRAHARR LGLAGAMVMR
     LALLASIAWV TRLTNPLFTI FSQEISARDL ILLLGGLFLI WKASKEIHES IEGEEEGLKT
     RVSSFLGAIV QIMLLDIIFS LDSVITAVGL SDHLFIMMAA VVIAVGVMMF AARSIGDFVE
     RHPSVKMLAL SFLILVGFTL ILESFDIHVP KGYIYFAMFF SIAVESLNLI RNKKNPL