ID   YGDR_ECOLI              Reviewed;          72 AA.
AC   P65294; Q2MA04; Q46932;
DT   11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT   11-OCT-2004, sequence version 1.
DT   03-AUG-2022, entry version 104.
DE   RecName: Full=Uncharacterized lipoprotein YgdR;
DE   Flags: Precursor;
GN   Name=ygdR; OrderedLocusNames=b2833, JW2801;
OS   Escherichia coli (strain K12).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=83333;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / MG1655 / ATCC 47076;
RX   PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA   Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA   Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA   Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA   Shao Y.;
RT   "The complete genome sequence of Escherichia coli K-12.";
RL   Science 277:1453-1462(1997).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX   PubMed=16738553; DOI=10.1038/msb4100049;
RA   Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA   Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT   "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT   and W3110.";
RL   Mol. Syst. Biol. 2:E1-E5(2006).
RN   [3]
RP   STRUCTURE BY NMR OF 21-72.
RG   Northeast structural genomics consortium (NESG);
RT   "Solution NMR structure of the ygdR protein from Escherichia coli.
RT   Northeast structural genomics target ER382A.";
RL   Submitted (MAY-2007) to the PDB data bank.
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000255|PROSITE-
CC       ProRule:PRU00303}; Lipid-anchor {ECO:0000255|PROSITE-ProRule:PRU00303}.
CC   -!- SIMILARITY: To E.coli YgdI. {ECO:0000305}.
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DR   EMBL; U29581; AAB40480.1; -; Genomic_DNA.
DR   EMBL; U00096; AAC75872.1; -; Genomic_DNA.
DR   EMBL; AP009048; BAE76902.1; -; Genomic_DNA.
DR   PIR; B65066; B65066.
DR   RefSeq; NP_417310.1; NC_000913.3.
DR   RefSeq; WP_000758655.1; NZ_STEB01000034.1.
DR   PDB; 2JN0; NMR; -; A=21-72.
DR   PDB; 3FIF; X-ray; 2.70 A; A/B/C/D/E/F/G/H=21-72.
DR   PDBsum; 2JN0; -.
DR   PDBsum; 3FIF; -.
DR   AlphaFoldDB; P65294; -.
DR   BMRB; P65294; -.
DR   SMR; P65294; -.
DR   BioGRID; 4262302; 11.
DR   BioGRID; 851632; 1.
DR   IntAct; P65294; 1.
DR   STRING; 511145.b2833; -.
DR   jPOST; P65294; -.
DR   PaxDb; P65294; -.
DR   PRIDE; P65294; -.
DR   EnsemblBacteria; AAC75872; AAC75872; b2833.
DR   EnsemblBacteria; BAE76902; BAE76902; BAE76902.
DR   GeneID; 67374287; -.
DR   GeneID; 947304; -.
DR   KEGG; ecj:JW2801; -.
DR   KEGG; eco:b2833; -.
DR   PATRIC; fig|511145.12.peg.2931; -.
DR   EchoBASE; EB2886; -.
DR   eggNOG; ENOG50333U0; Bacteria.
DR   HOGENOM; CLU_182841_0_1_6; -.
DR   OMA; AVMISGC; -.
DR   PhylomeDB; P65294; -.
DR   BioCyc; EcoCyc:G7461-MON; -.
DR   EvolutionaryTrace; P65294; -.
DR   PRO; PR:P65294; -.
DR   Proteomes; UP000000318; Chromosome.
DR   Proteomes; UP000000625; Chromosome.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   InterPro; IPR010305; DUF903.
DR   InterPro; IPR010920; LSM_dom_sf.
DR   PANTHER; PTHR37011; PTHR37011; 1.
DR   Pfam; PF06004; DUF903; 1.
DR   SUPFAM; SSF50182; SSF50182; 1.
DR   PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Cell membrane; Lipoprotein; Membrane; Palmitate;
KW   Reference proteome; Signal.
FT   SIGNAL          1..19
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT   CHAIN           20..72
FT                   /note="Uncharacterized lipoprotein YgdR"
FT                   /id="PRO_0000018050"
FT   LIPID           20
FT                   /note="N-palmitoyl cysteine"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT   LIPID           20
FT                   /note="S-diacylglycerol cysteine"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT   STRAND          23..28
FT                   /evidence="ECO:0007829|PDB:3FIF"
FT   STRAND          33..35
FT                   /evidence="ECO:0007829|PDB:3FIF"
FT   STRAND          41..43
FT                   /evidence="ECO:0007829|PDB:3FIF"
FT   TURN            44..47
FT                   /evidence="ECO:0007829|PDB:3FIF"
FT   STRAND          48..52
FT                   /evidence="ECO:0007829|PDB:3FIF"
FT   STRAND          54..56
FT                   /evidence="ECO:0007829|PDB:3FIF"
FT   STRAND          58..62
FT                   /evidence="ECO:0007829|PDB:3FIF"
FT   HELIX           63..65
FT                   /evidence="ECO:0007829|PDB:3FIF"
FT   STRAND          66..72
FT                   /evidence="ECO:0007829|PDB:3FIF"
SQ   SEQUENCE   72 AA;  7877 MW;  7E053CA350712598 CRC64;
     MKKWAVIISA VGLAFAVSGC SSDYVMATKD GRMILTDGKP EIDDDTGLVS YHDQQGNAMQ
     INRDDVSQII ER