YGER_ECOLI
ID YGER_ECOLI Reviewed; 251 AA.
AC Q46798; Q2M9X5;
DT 27-MAR-2002, integrated into UniProtKB/Swiss-Prot.
DT 27-MAR-2002, sequence version 2.
DT 03-AUG-2022, entry version 152.
DE RecName: Full=Uncharacterized lipoprotein YgeR;
DE Flags: Precursor;
GN Name=ygeR; OrderedLocusNames=b2865, JW2833;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP POSSIBLE SUBCELLULAR LOCATION, AND DISRUPTION PHENOTYPE.
RC STRAIN=K12 / MG1655 / TB28;
RX PubMed=19525345; DOI=10.1128/jb.00505-09;
RA Uehara T., Dinh T., Bernhardt T.G.;
RT "LytM-domain factors are required for daughter cell separation and rapid
RT ampicillin-induced lysis in Escherichia coli.";
RL J. Bacteriol. 191:5094-5107(2009).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000305}; Lipid-anchor
CC {ECO:0000255|PROSITE-ProRule:PRU00303}. Note=Slightly enriched at the
CC septal ring.
CC -!- DISRUPTION PHENOTYPE: Cells are shorter in a single mutant, while
CC triple envC-nlpD-ygeR disruptions have defects in septation and cell
CC separation and form long filaments (15-fold longer) and further yet by
CC the quadruple disruption mutant (envC-nlpD-mepM(yebA)-ygeR, over 21-
CC fold longer). Quadruple mutants are less sensitive to ampicillin lysis.
CC {ECO:0000269|PubMed:19525345}.
CC -!- SIMILARITY: Belongs to the peptidase M23B family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAA83046.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR EMBL; U28375; AAA83046.1; ALT_INIT; Genomic_DNA.
DR EMBL; U00096; AAC75903.2; -; Genomic_DNA.
DR EMBL; AP009048; BAE76931.1; -; Genomic_DNA.
DR PIR; A65070; A65070.
DR RefSeq; NP_417341.4; NC_000913.3.
DR RefSeq; WP_001301085.1; NZ_LN832404.1.
DR AlphaFoldDB; Q46798; -.
DR SMR; Q46798; -.
DR BioGRID; 4262318; 185.
DR DIP; DIP-36034N; -.
DR IntAct; Q46798; 5.
DR STRING; 511145.b2865; -.
DR jPOST; Q46798; -.
DR PaxDb; Q46798; -.
DR PRIDE; Q46798; -.
DR EnsemblBacteria; AAC75903; AAC75903; b2865.
DR EnsemblBacteria; BAE76931; BAE76931; BAE76931.
DR GeneID; 947352; -.
DR KEGG; ecj:JW2833; -.
DR KEGG; eco:b2865; -.
DR PATRIC; fig|511145.12.peg.2958; -.
DR EchoBASE; EB2860; -.
DR eggNOG; COG4942; Bacteria.
DR HOGENOM; CLU_029425_0_4_6; -.
DR InParanoid; Q46798; -.
DR OMA; WTWPANG; -.
DR PhylomeDB; Q46798; -.
DR BioCyc; EcoCyc:G7484-MON; -.
DR PRO; PR:Q46798; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0032153; C:cell division site; IBA:GO_Central.
DR GO; GO:0009279; C:cell outer membrane; IBA:GO_Central.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0004222; F:metalloendopeptidase activity; IBA:GO_Central.
DR GO; GO:0000920; P:septum digestion after cytokinesis; IBA:GO_Central.
DR CDD; cd00118; LysM; 1.
DR Gene3D; 2.70.70.10; -; 1.
DR Gene3D; 3.10.350.10; -; 1.
DR InterPro; IPR011055; Dup_hybrid_motif.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR InterPro; IPR016047; Peptidase_M23.
DR Pfam; PF01476; LysM; 1.
DR Pfam; PF01551; Peptidase_M23; 1.
DR SMART; SM00257; LysM; 1.
DR SUPFAM; SSF51261; SSF51261; 1.
DR PROSITE; PS51782; LYSM; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Cell inner membrane; Cell membrane; Lipoprotein; Membrane; Palmitate;
KW Reference proteome; Signal.
FT SIGNAL 1..25
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT CHAIN 26..251
FT /note="Uncharacterized lipoprotein YgeR"
FT /id="PRO_0000013776"
FT DOMAIN 40..84
FT /note="LysM"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01118"
FT REGION 93..115
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT LIPID 26
FT /note="N-palmitoyl cysteine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
FT LIPID 26
FT /note="S-diacylglycerol cysteine"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00303"
SQ SEQUENCE 251 AA; 26565 MW; FCD6235D39790475 CRC64;
MSAGRLNKKS LGIVMLLSVG LLLAGCSGSK SSDTGTYSGS VYTVKRGDTL YRISRTTGTS
VKELARLNGI SPPYTIEVGQ KLKLGGAKSS SITRKSTAKS TTKTASVTPS SAVPKSSWPP
VGQRCWLWPT TGKVIMPYST ADGGNKGIDI SAPRGTPIYA AGAGKVVYVG NQLRGYGNLI
MIKHSEDYIT AYAHNDTMLV NNGQSVKAGQ KIATMGSTDA ASVRLHFQIR YRATAIDPLR
YLPPQGSKPK C