YGJV_ECOLI
ID YGJV_ECOLI Reviewed; 183 AA.
AC P42603; Q2M9B6;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1995, sequence version 1.
DT 03-AUG-2022, entry version 124.
DE RecName: Full=Inner membrane protein YgjV;
GN Name=ygjV; OrderedLocusNames=b3090, JW3061;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RA Mizobuchi K.;
RL Submitted (SEP-1992) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP TOPOLOGY.
RC STRAIN=K12 / JM109 / ATCC 53323;
RX PubMed=11867724; DOI=10.1073/pnas.052018199;
RA Drew D., Sjoestrand D., Nilsson J., Urbig T., Chin C.-N., de Gier J.-W.,
RA von Heijne G.;
RT "Rapid topology mapping of Escherichia coli inner-membrane proteins by
RT prediction and PhoA/GFP fusion analysis.";
RL Proc. Natl. Acad. Sci. U.S.A. 99:2690-2695(2002).
RN [5]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
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DR EMBL; D13328; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; U18997; AAA57892.1; -; Genomic_DNA.
DR EMBL; U00096; AAC76125.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE77140.1; -; Genomic_DNA.
DR PIR; G65097; G65097.
DR RefSeq; NP_417561.1; NC_000913.3.
DR RefSeq; WP_000128135.1; NZ_LN832404.1.
DR AlphaFoldDB; P42603; -.
DR BioGRID; 4262406; 11.
DR STRING; 511145.b3090; -.
DR TCDB; 9.B.221.1.1; the 5 tms ygjv (ygjv) family.
DR PaxDb; P42603; -.
DR PRIDE; P42603; -.
DR EnsemblBacteria; AAC76125; AAC76125; b3090.
DR EnsemblBacteria; BAE77140; BAE77140; BAE77140.
DR GeneID; 947604; -.
DR KEGG; ecj:JW3061; -.
DR KEGG; eco:b3090; -.
DR PATRIC; fig|1411691.4.peg.3639; -.
DR EchoBASE; EB2591; -.
DR eggNOG; ENOG502ZBTK; Bacteria.
DR HOGENOM; CLU_107941_0_0_6; -.
DR OMA; LFNSFCW; -.
DR BioCyc; EcoCyc:G7608-MON; -.
DR PRO; PR:P42603; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0005887; C:integral component of plasma membrane; IDA:EcoliWiki.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR InterPro; IPR019629; Uncharacterised_HI1736/YgjV.
DR InterPro; IPR026267; YgjV.
DR Pfam; PF10688; Imp-YgjV; 1.
DR PIRSF; PIRSF011443; YgjV; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..183
FT /note="Inner membrane protein YgjV"
FT /id="PRO_0000169426"
FT TOPO_DOM 1..2
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 3..23
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 24..38
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 39..59
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 60..71
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 72..92
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 93..113
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 114..133
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 134..154
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 155..183
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 183 AA; 20512 MW; F7D5ECE3820BD821 CRC64;
MTAYWLAQGV GVIAFLIGIT TFFNRDERRF KKQLSVYSAV IGVHFFLLGT YPAGASAILN
AIRTLITLRT RSLWVMAIFI VLTGGIGLAK FHHPVELLPV IGTIVSTWAL FCCKGLTMRC
VMWFSTCCWV IHNFWAGSIG GTMIEGSFLL MNGLNIIRFW RMQKRGIDPF KVEKTPSAVD
ERG