YGSA_SCHPO
ID YGSA_SCHPO Reviewed; 1944 AA.
AC O94387;
DT 23-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Uncharacterized ATP-dependent helicase C29A10.10c;
DE EC=3.6.4.-;
GN ORFNames=SPBC29A10.10c;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX PubMed=16823372; DOI=10.1038/nbt1222;
RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
RA Yoshida M.;
RT "ORFeome cloning and global analysis of protein localization in the fission
RT yeast Schizosaccharomyces pombe.";
RL Nat. Biotechnol. 24:841-847(2006).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16823372}.
CC -!- SIMILARITY: Belongs to the DNA2/NAM7 helicase family. {ECO:0000305}.
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DR EMBL; CU329671; CAA22438.1; -; Genomic_DNA.
DR PIR; T40065; T40065.
DR RefSeq; NP_596055.1; NM_001021966.2.
DR AlphaFoldDB; O94387; -.
DR SMR; O94387; -.
DR BioGRID; 277051; 38.
DR STRING; 4896.SPBC29A10.10c.1; -.
DR iPTMnet; O94387; -.
DR MaxQB; O94387; -.
DR PaxDb; O94387; -.
DR PRIDE; O94387; -.
DR EnsemblFungi; SPBC29A10.10c.1; SPBC29A10.10c.1:pep; SPBC29A10.10c.
DR GeneID; 2540523; -.
DR KEGG; spo:SPBC29A10.10c; -.
DR PomBase; SPBC29A10.10c; -.
DR VEuPathDB; FungiDB:SPBC29A10.10c; -.
DR eggNOG; KOG1801; Eukaryota.
DR HOGENOM; CLU_000459_2_0_1; -.
DR InParanoid; O94387; -.
DR OMA; YGCSKCI; -.
DR PhylomeDB; O94387; -.
DR PRO; PR:O94387; -.
DR Proteomes; UP000002485; Chromosome II.
DR GO; GO:0000785; C:chromatin; IDA:PomBase.
DR GO; GO:0016604; C:nuclear body; IBA:GO_Central.
DR GO; GO:0030874; C:nucleolar chromatin; IDA:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0035861; C:site of double-strand break; IDA:PomBase.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003724; F:RNA helicase activity; ISO:PomBase.
DR GO; GO:0001147; F:transcription termination site sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0031123; P:RNA 3'-end processing; ISO:PomBase.
DR GO; GO:0006369; P:termination of RNA polymerase II transcription; IBA:GO_Central.
DR GO; GO:0006399; P:tRNA metabolic process; NAS:PomBase.
DR CDD; cd18808; SF1_C_Upf1; 1.
DR Gene3D; 3.40.50.300; -; 2.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR045055; DNA2/NAM7-like.
DR InterPro; IPR041679; DNA2/NAM7-like_C.
DR InterPro; IPR041677; DNA2/NAM7_AAA_11.
DR InterPro; IPR024481; Helicase_Sen1_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR026121; Sen1.
DR PANTHER; PTHR10887; PTHR10887; 2.
DR PANTHER; PTHR10887:SF487; PTHR10887:SF487; 2.
DR Pfam; PF13086; AAA_11; 1.
DR Pfam; PF13087; AAA_12; 1.
DR Pfam; PF12726; SEN1_N; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Helicase; Hydrolase; Nucleotide-binding; Nucleus;
KW Reference proteome.
FT CHAIN 1..1944
FT /note="Uncharacterized ATP-dependent helicase C29A10.10c"
FT /id="PRO_0000350747"
FT REGION 908..999
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1824..1944
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1824..1856
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1869..1911
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 1293..1300
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250"
SQ SEQUENCE 1944 AA; 222211 MW; 12B005A934BEE11C CRC64;
MENDEAFDRL IRKIQENQKH PSFEGSNKVL HLALSYLNTN RQNPHWVCDP KLQVAVRECL
FLFSFQNDNE YLVWFKKHLN ERLQLCPKCI VKYHQSLDDF KSLCLNIFHF DPNTLEIVME
KIYSWDIFRL QEVLKTVPKI DTSSASKPIL CAFYEILYSP RILHNKEIFP LFRNRFLESG
FLRLSKNLVP GVISLLFSRD DELRRWACSI LSDVKTISDN EFKILEGPLL QEIRSLDQKK
ENENEMQIFL KGLSLLLKHV DHLYFRGLTG KNFNVADFIL SGLQSDHTNL CPSFLVCLHS
LLYCYGRNFW TPEISPSEVI DKIFNGNAYK RWTEENTSNF SNDQKAENPF EWATSLLKTI
SIIDEVELIN KILINYTMQY KKELEVGFKN VQLLQSLADI FSVLFSEYFM IFPHSDQSLQ
NKVFELHSTL AIKFDELFRL LNLENEESVE WRLIKKVFEY RLNLDLYILK QFYCHYLDRN
RKPPLNIKSV SESFKNFWVY LQNVFREEKF FMVRIVFRAC STVCLIDKLP PKKVDIPFKS
DFENALNGFV ATFSEMLIQT QCWHLSAQTQ LVSNPLTFRG IFSLVFSPIL EISTGSISII
KSISLSDSVV DTIGELLRSQ FSNTLNSSCY VLLQWLKVRN FGGAKHIVYF NKLIINTIFD
SVDGLTSKDA TFAKQVEKKE SLKNFWESLW KFFTHFFIVL PTWPVHDKDN LVDLMRDTLD
FCDMLINIFE EVNGFIFGLS DNDIKIVSAN DKGSALAMCI ADSLVTVSYW LKLTDSSLLT
SVVKVICKML KICKKLECPI SQNVIDIIHR ASITSDEQTI LTFTEREDLF ISLTPYLSED
VLNHSPFNDT NTLETKLQSD DRGLLSKDQT IGIAKKLPES NISTSNHFLL PPKAISASKA
INRNAQKSQN LNFLKSKQET TQRIRESAKV PRTSAGNHLS EKLNSDNHIP KALQKLDSAD
PIRKPSLLHT SKSYSNPDDK NTSTSDEDTS ESEEESSNGL FSLAREANSH ASKSLPQRRQ
IQFLDFDSLK TKNVVHPTQL RRNTQQSAQL ARLRLNPDVQ EFYKVILGWN PLADSFSASN
VEMQCVQAKF TYNDSNAYEK VFKPMLFHEC WAQVKSAVEE KQYPPIDLIL NTRSTVDNFV
DIYFTSCSPT EVSFLSDTDI CLLSKSQSSG DTNNPKSFQL CKIQSISRKK ESLELCLRMN
IESIDLQEYA PNIRFTAQKL FNATTSLREF AALKSLRHLP LSQRILDANV TRLPSNFTDD
KKQKIMKSYG VNEPQAYAIY ASSVNDGFTL IQGPPGTGKT KTILGMIGAV LTSSSQGLQF
NVPGQTRKTS KNKILICAPS NAAIDEILLR IKAGVYDHEG IKFFPKVIRV GFGDSISVHA
KEFTLEEQMI KQMELTNLKK DQEANNSSDT RKKYDSIIKK RDSLREDLEK FRSTGKNSSI
LEAQLREITK QKNMLEQSLD DMRERQRSTN RNLDVLKKQI QNQLLQEADI VCATLSASGH
ELLLNAGLTF RTVIIDEAAQ AVELSSIIPL KYGCESCVMV GDPNQLPPTV LSKTSAKFGY
SQSLYVRMFK QHNESACLLS IQYRMNPEIS RFPSKFFYNS KLLDGPNMSA VTSRPWHEDP
QLGIYRFFNV HGTEAFSNSK SLYNVEEASF ILLLYERLIQ CYLNIDFEGK IGVVTPYRSQ
VQQLRSQFQR KYGSIIFKHL DIHTVDGFQG QEKDIIIFSC VRSSMSGGIG FLQDLRRLNV
ALTRAKSSLY IVGNSKPLMQ EDIFYSLIED AKTRGVWRDL SANQFKNSKS ISNVSTHLAS
NNLNLASRDT PIKSPSVGIC EEKQEAHKVK KRHNIDSANL SRGTERDEDI PNKRAKNKVS
TDQTAADNKV TKPRLDESSS SKQDVLNKID ESEIEQASSK KPGYVEKNKD KGHMKKSKKP
KSKLALAAMA HGFAPPKVEH FKRK