ID   YHAM_ALKCK              Reviewed;         319 AA.
AC   Q5WHU5;
DT   02-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT   23-NOV-2004, sequence version 1.
DT   25-MAY-2022, entry version 99.
DE   RecName: Full=3'-5' exoribonuclease YhaM {ECO:0000255|HAMAP-Rule:MF_01427};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01427};
GN   Name=yhaM {ECO:0000255|HAMAP-Rule:MF_01427}; OrderedLocusNames=ABC1525;
OS   Alkalihalobacillus clausii (strain KSM-K16) (Bacillus clausii).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Alkalihalobacillus.
OX   NCBI_TaxID=66692;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=KSM-K16;
RA   Takaki Y., Kageyama Y., Shimamura S., Suzuki H., Nishi S., Hatada Y.,
RA   Kawai S., Ito S., Horikoshi K.;
RT   "The complete genome sequence of the alkaliphilic Bacillus clausii KSM-
RT   K16.";
RL   Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Shows a 3'-5' exoribonuclease activity. {ECO:0000255|HAMAP-
CC       Rule:MF_01427}.
CC   -!- SIMILARITY: Belongs to the YhaM family. {ECO:0000255|HAMAP-
CC       Rule:MF_01427}.
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DR   EMBL; AP006627; BAD64060.1; -; Genomic_DNA.
DR   RefSeq; WP_011246369.1; NC_006582.1.
DR   AlphaFoldDB; Q5WHU5; -.
DR   SMR; Q5WHU5; -.
DR   STRING; 66692.ABC1525; -.
DR   EnsemblBacteria; BAD64060; BAD64060; ABC1525.
DR   KEGG; bcl:ABC1525; -.
DR   eggNOG; COG3481; Bacteria.
DR   HOGENOM; CLU_056349_2_0_9; -.
DR   OMA; NLVGHLV; -.
DR   OrthoDB; 2018439at2; -.
DR   Proteomes; UP000001168; Chromosome.
DR   GO; GO:0000175; F:3'-5'-exoribonuclease activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd00077; HDc; 1.
DR   Gene3D; 2.40.50.140; -; 1.
DR   HAMAP; MF_01427; 3_5_Exoribonuc_YhaM; 1.
DR   InterPro; IPR020873; 3'-5'_exoribonuclease_YhaM.
DR   InterPro; IPR003607; HD/PDEase_dom.
DR   InterPro; IPR006674; HD_domain.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   Pfam; PF01966; HD; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   PROSITE; PS51831; HD; 1.
PE   3: Inferred from homology;
KW   DNA-binding; Exonuclease; Hydrolase; Nuclease; Reference proteome.
FT   CHAIN           1..319
FT                   /note="3'-5' exoribonuclease YhaM"
FT                   /id="PRO_0000109860"
FT   DOMAIN          163..279
FT                   /note="HD"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01175"
FT   DNA_BIND        12..90
FT                   /note="OB"
SQ   SEQUENCE   319 AA;  35887 MW;  24DC39E613AE86EA CRC64;
     MAKGIRHHRV GEAVDGYLLI KTATKQIASN SKPFLTLILG DHTGEIEAKL WGISPEDEAT
     FVNKTIVHIQ GDVIDYRGRL QLKIASIRPT SAMDGVHLND FVRSAPLAPN DMLDEVNQYI
     FEIHNPHIQR ITRFLLKKHQ QAFLESPAAT KNHHEFMSGL AFHVVSMLRI GKSLIELYPT
     LDKDLLYAGI ILHDLGKVRE LSGAIDTTYT LEGKLLGHIS IMSNEIAQAA KELEIDGEEV
     LILQHLILSH HGKGEWGSPK TPVVREAEVL HLIDNIDAKI NMMDRALERV QPGEFSERVM
     ALDNRSFYKP SFHKKPIEL