ID   YHAM_ALKHC              Reviewed;         320 AA.
AC   Q9KDN6;
DT   02-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 118.
DE   RecName: Full=3'-5' exoribonuclease YhaM {ECO:0000255|HAMAP-Rule:MF_01427};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01427};
GN   Name=yhaM {ECO:0000255|HAMAP-Rule:MF_01427}; OrderedLocusNames=BH1175;
OS   Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344
OS   / JCM 9153 / C-125) (Bacillus halodurans).
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Alkalihalobacillus.
OX   NCBI_TaxID=272558;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125;
RX   PubMed=11058132; DOI=10.1093/nar/28.21.4317;
RA   Takami H., Nakasone K., Takaki Y., Maeno G., Sasaki R., Masui N., Fuji F.,
RA   Hirama C., Nakamura Y., Ogasawara N., Kuhara S., Horikoshi K.;
RT   "Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans
RT   and genomic sequence comparison with Bacillus subtilis.";
RL   Nucleic Acids Res. 28:4317-4331(2000).
CC   -!- FUNCTION: Shows a 3'-5' exoribonuclease activity. {ECO:0000255|HAMAP-
CC       Rule:MF_01427}.
CC   -!- SIMILARITY: Belongs to the YhaM family. {ECO:0000255|HAMAP-
CC       Rule:MF_01427}.
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DR   EMBL; BA000004; BAB04894.1; -; Genomic_DNA.
DR   PIR; G83796; G83796.
DR   RefSeq; WP_010897345.1; NC_002570.2.
DR   AlphaFoldDB; Q9KDN6; -.
DR   SMR; Q9KDN6; -.
DR   STRING; 272558.10173791; -.
DR   EnsemblBacteria; BAB04894; BAB04894; BAB04894.
DR   KEGG; bha:BH1175; -.
DR   eggNOG; COG3481; Bacteria.
DR   HOGENOM; CLU_056349_2_0_9; -.
DR   OMA; NLVGHLV; -.
DR   OrthoDB; 2018439at2; -.
DR   Proteomes; UP000001258; Chromosome.
DR   GO; GO:0000175; F:3'-5'-exoribonuclease activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd00077; HDc; 1.
DR   Gene3D; 2.40.50.140; -; 1.
DR   HAMAP; MF_01427; 3_5_Exoribonuc_YhaM; 1.
DR   InterPro; IPR020873; 3'-5'_exoribonuclease_YhaM.
DR   InterPro; IPR003607; HD/PDEase_dom.
DR   InterPro; IPR006674; HD_domain.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR004365; NA-bd_OB_tRNA.
DR   Pfam; PF01966; HD; 1.
DR   Pfam; PF01336; tRNA_anti-codon; 1.
DR   SMART; SM00471; HDc; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   PROSITE; PS51831; HD; 1.
PE   3: Inferred from homology;
KW   DNA-binding; Exonuclease; Hydrolase; Nuclease; Reference proteome.
FT   CHAIN           1..320
FT                   /note="3'-5' exoribonuclease YhaM"
FT                   /id="PRO_0000109857"
FT   DOMAIN          163..279
FT                   /note="HD"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01175"
FT   DNA_BIND        18..90
FT                   /note="OB"
SQ   SEQUENCE   320 AA;  35793 MW;  2C5E1AB34A9B2B2C CRC64;
     MSRGILYYQV GEALESYFLI KSATKAVASN GKPFLTLILS DHTGEIEAKL WGCSPEDEAT
     FVSGAIVHIS GQLSEYRGRQ QLKIGSIRPT TAMDQVKVSD FVRSAPLSPD DMLEQITQYI
     FEMKNPKIQR MTRHLLKKHQ TAFLEYPAAT TNHHEFVSGL AYHVVCMLNV AKSLAALYPT
     LDTDLLYAGI ILHDLGKVKE LSGPIDTTYT IEGKLLGHIS ILVNEIGETA NELGIEGEEV
     IILQHLVLAH HSKGEWGSPK PPLIREAEIL HMIDNIDAKM NMMDRALERV QPGEFSERIK
     AMDNRSFYKP NFHEPPLDLS