ID   YHAM_BACAN              Reviewed;         314 AA.
AC   Q81U72; Q6I2F9; Q6KW86;
DT   02-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-2003, sequence version 1.
DT   25-MAY-2022, entry version 123.
DE   RecName: Full=3'-5' exoribonuclease YhaM {ECO:0000255|HAMAP-Rule:MF_01427};
DE            EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_01427};
GN   Name=yhaM {ECO:0000255|HAMAP-Rule:MF_01427};
GN   OrderedLocusNames=BA_1012, GBAA_1012, BAS0947;
OS   Bacillus anthracis.
OC   Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus;
OC   Bacillus cereus group.
OX   NCBI_TaxID=1392;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Ames / isolate Porton;
RX   PubMed=12721629; DOI=10.1038/nature01586;
RA   Read T.D., Peterson S.N., Tourasse N.J., Baillie L.W., Paulsen I.T.,
RA   Nelson K.E., Tettelin H., Fouts D.E., Eisen J.A., Gill S.R.,
RA   Holtzapple E.K., Okstad O.A., Helgason E., Rilstone J., Wu M.,
RA   Kolonay J.F., Beanan M.J., Dodson R.J., Brinkac L.M., Gwinn M.L.,
RA   DeBoy R.T., Madpu R., Daugherty S.C., Durkin A.S., Haft D.H., Nelson W.C.,
RA   Peterson J.D., Pop M., Khouri H.M., Radune D., Benton J.L., Mahamoud Y.,
RA   Jiang L., Hance I.R., Weidman J.F., Berry K.J., Plaut R.D., Wolf A.M.,
RA   Watkins K.L., Nierman W.C., Hazen A., Cline R.T., Redmond C., Thwaite J.E.,
RA   White O., Salzberg S.L., Thomason B., Friedlander A.M., Koehler T.M.,
RA   Hanna P.C., Kolstoe A.-B., Fraser C.M.;
RT   "The genome sequence of Bacillus anthracis Ames and comparison to closely
RT   related bacteria.";
RL   Nature 423:81-86(2003).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Ames ancestor;
RX   PubMed=18952800; DOI=10.1128/jb.01347-08;
RA   Ravel J., Jiang L., Stanley S.T., Wilson M.R., Decker R.S., Read T.D.,
RA   Worsham P., Keim P.S., Salzberg S.L., Fraser-Liggett C.M., Rasko D.A.;
RT   "The complete genome sequence of Bacillus anthracis Ames 'Ancestor'.";
RL   J. Bacteriol. 191:445-446(2009).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Sterne;
RA   Brettin T.S., Bruce D., Challacombe J.F., Gilna P., Han C., Hill K.,
RA   Hitchcock P., Jackson P., Keim P., Longmire J., Lucas S., Okinaka R.,
RA   Richardson P., Rubin E., Tice H.;
RT   "Complete genome sequence of Bacillus anthracis Sterne.";
RL   Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Shows a 3'-5' exoribonuclease activity. {ECO:0000255|HAMAP-
CC       Rule:MF_01427}.
CC   -!- SIMILARITY: Belongs to the YhaM family. {ECO:0000255|HAMAP-
CC       Rule:MF_01427}.
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DR   EMBL; AE016879; AAP24999.1; -; Genomic_DNA.
DR   EMBL; AE017334; AAT30115.1; -; Genomic_DNA.
DR   EMBL; AE017225; AAT53272.1; -; Genomic_DNA.
DR   RefSeq; NP_843513.1; NC_003997.3.
DR   RefSeq; WP_000726642.1; NZ_WXXJ01000044.1.
DR   RefSeq; YP_027221.1; NC_005945.1.
DR   AlphaFoldDB; Q81U72; -.
DR   SMR; Q81U72; -.
DR   STRING; 261594.GBAA_1012; -.
DR   DNASU; 1088945; -.
DR   EnsemblBacteria; AAP24999; AAP24999; BA_1012.
DR   EnsemblBacteria; AAT30115; AAT30115; GBAA_1012.
DR   GeneID; 56650894; -.
DR   KEGG; ban:BA_1012; -.
DR   KEGG; bar:GBAA_1012; -.
DR   KEGG; bat:BAS0947; -.
DR   PATRIC; fig|198094.11.peg.1003; -.
DR   eggNOG; COG3481; Bacteria.
DR   HOGENOM; CLU_056349_2_0_9; -.
DR   OMA; NLVGHLV; -.
DR   Proteomes; UP000000427; Chromosome.
DR   Proteomes; UP000000594; Chromosome.
DR   GO; GO:0000175; F:3'-5'-exoribonuclease activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd00077; HDc; 1.
DR   Gene3D; 2.40.50.140; -; 1.
DR   HAMAP; MF_01427; 3_5_Exoribonuc_YhaM; 1.
DR   InterPro; IPR020873; 3'-5'_exoribonuclease_YhaM.
DR   InterPro; IPR003607; HD/PDEase_dom.
DR   InterPro; IPR006674; HD_domain.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR004365; NA-bd_OB_tRNA.
DR   Pfam; PF01966; HD; 1.
DR   Pfam; PF01336; tRNA_anti-codon; 1.
DR   SMART; SM00471; HDc; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   PROSITE; PS51831; HD; 1.
PE   3: Inferred from homology;
KW   DNA-binding; Exonuclease; Hydrolase; Nuclease; Reference proteome.
FT   CHAIN           1..314
FT                   /note="3'-5' exoribonuclease YhaM"
FT                   /id="PRO_0000109853"
FT   DOMAIN          163..279
FT                   /note="HD"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01175"
FT   DNA_BIND        14..90
FT                   /note="OB"
SQ   SEQUENCE   314 AA;  35500 MW;  EA5033FE6DF71ECB CRC64;
     MKKKIAEYEV GEQVDVFLLI KTATKGIASN GKPFLTVILQ DPSGDIEAKL WDVSPEVEKQ
     YVAETIVKVA GDILNYKGRI QLRVKQIRVA NENEVTDISD FVEKAPVKKE DMVEKITQYI
     FEMRNPNIQR LTRHLLNKHQ NEFLDYPAAT KNHHEFVSGL AYHVVSMLDL AKAISNLYPS
     LDKDLLYAGV ILHDLGKVIE LSGPISTTYT LEGNLLGHIS IMVNEIGKAA DELQIDAEEV
     LILQHIVLSH HGKAEWGSPK PPLVKEAEIL HYIDNLDAKM NMMDRALGRT KPGEYTERVF
     ALDNRSFYKP SFHN